Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC092376.2-201ENST00000622621 4116 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RIPK2O43353 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC092681.1-201ENST00000297369 291 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 THEM7P-201ENST00000419556 672 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AC019205.1-201ENST00000421830 730 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK2O43353 TMEM183AP1-205ENST00000432739 290 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 DEFA9P-201ENST00000433042 285 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC092601.1-201ENST00000444526 383 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AC234771.2-201ENST00000445718 597 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 PPIAP7-201ENST00000454070 489 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 RBMY2HP-201ENST00000457961 720 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK2O43353 RN7SL393P-201ENST00000463588 296 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 AP000620.1-201ENST00000527147 504 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC122688.1-201ENST00000541494 223 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.8□□□□□ -1.48
RIPK2O43353 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.8□□□□□ -1.48
RIPK2O43353 AL358913.1-201ENST00000554342 121 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC234775.3-201ENST00000564612 656 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
RIPK2O43353 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 MIR4660-201ENST00000583549 74 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC018809.2-201ENST00000602436 3823 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 Z95327.3-201ENST00000610385 572 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 MIR6737-201ENST00000617385 70 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AC091059.2-201ENST00000623355 614 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.8□□□□□ -1.48
RIPK2O43353 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIPK2O43353 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 AC068870.1-201ENST00000563737 2455 ntBASIC5.8□□□□□ -1.48
RIPK2O43353 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.8□□□□□ -1.48
RIPK2O43353 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.79□□□□□ -1.48
RIPK2O43353 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIPK2O43353 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RIPK2O43353 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIPK2O43353 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 PSMA6P1-201ENST00000400275 741 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 RNF10P1-201ENST00000418589 369 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 HMGN1P16-201ENST00000508308 283 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.79□□□□□ -1.48
RIPK2O43353 RNA5SP230-201ENST00000517039 122 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC138832.1-201ENST00000522871 556 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 AC079064.1-201ENST00000528365 362 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIPK2O43353 SLC25A51P2-201ENST00000535708 889 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 MIR3157-201ENST00000578688 85 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIPK2O43353 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC002069.2-201ENST00000603580 883 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms