Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ARPC3P1-201ENST00000437218 533 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 DNAJA1P6-201ENST00000437347 354 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC108039.2-201ENST00000440214 359 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 RPSAP49-201ENST00000445182 886 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC092421.1-201ENST00000448148 418 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 IGLV10-67-201ENST00000519446 325 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC239860.2-201ENST00000525886 270 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AP000619.1-201ENST00000540293 1000 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC125611.2-201ENST00000551907 647 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC142086.3-201ENST00000563896 802 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 MEMO1P5-201ENST00000604810 406 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AL359535.1-201ENST00000612100 1087 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AL445264.1-201ENST00000621719 171 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 RPL36AP21-202ENST00000639134 430 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 THAP12P1-201ENST00000398672 2203 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC009948.5-201ENST00000624360 4406 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 MAPK10-313ENST00000641405 2469 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC100871.1-201ENST00000507871 1456 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AL390195.2-201ENST00000564771 2023 ntBASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHB11Q9Y5F2 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC138207.6-201ENST00000579164 1967 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RNU6-244P-201ENST00000391028 104 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 GSTA9P-201ENST00000406231 611 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL356776.1-201ENST00000406574 447 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 MIR1302-11-201ENST00000408051 138 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 MIR1302-9-201ENST00000408365 138 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 MIR1302-10-201ENST00000408734 138 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 GAPDHP49-201ENST00000421421 961 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RPSAP62-201ENST00000432596 833 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 NDUFA5P4-201ENST00000436704 385 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RPS19P6-201ENST00000441327 433 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC239860.1-201ENST00000444680 1270 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 OR51P1P-201ENST00000447547 942 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC004692.1-201ENST00000455430 424 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 PMCHL2-203ENST00000457791 237 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AL590326.1-201ENST00000460857 334 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 RPL34P22-201ENST00000468193 318 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 HMGN2P25-201ENST00000486956 268 ntBASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHB11Q9Y5F2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms