Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC092447.3-201ENST00000426027 686 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 HLA-DPA3-207ENST00000454398 229 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 LARP7P4-201ENST00000481075 878 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 SUMO2P4-201ENST00000504193 276 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC093763.2-201ENST00000505334 1223 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 OR5H7P-201ENST00000514084 930 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 RN7SKP5-201ENST00000517045 272 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 OR10D4P-201ENST00000525892 951 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC117490.2-201ENST00000610042 594 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC138907.10-201ENST00000623708 983 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AL356118.1-201ENST00000635272 1078 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 MAPK10-344ENST00000641718 3746 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 MAPK10-365ENST00000641902 3825 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC008627.1-201ENST00000517511 1704 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 GUCY1B2-204ENST00000531898 1979 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 MTHFD2P5-201ENST00000320415 844 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 MIR433-201ENST00000384837 93 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 PTGES3P2-201ENST00000407942 482 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AC013268.2-201ENST00000420753 337 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 CFL1P4-201ENST00000451536 498 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AC084754.1-201ENST00000463466 464 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AC092824.1-201ENST00000483524 576 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 RPS3AP6-201ENST00000484430 795 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 CIR1P1-201ENST00000524055 1133 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AC015911.5-201ENST00000587076 451 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 AC084782.3-201ENST00000612282 578 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 CR589904.2-201ENST00000612533 440 ntBASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CTDP1Q9Y5B0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 MTCO1P15-201ENST00000529569 1526 ntBASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CTDP1Q9Y5B0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AL133243.4-201ENST00000623116 3109 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 RN7SKP78-201ENST00000364711 318 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AL353692.2-201ENST00000407054 335 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AL139039.2-201ENST00000407436 479 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 RNU4-64P-201ENST00000410795 131 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 SLC20A1P1-201ENST00000413906 956 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 SSR1P2-201ENST00000415208 787 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 PARP4P1-201ENST00000435945 2337 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC016908.1-201ENST00000442571 1219 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 MTND5P8-201ENST00000449817 1083 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms