Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
COPS3Q9UNS2 CASC19-248ENST00000641674 1356 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC104260.2-201ENST00000623551 3497 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AP001029.2-203ENST00000589795 4910 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AP004607.3-201ENST00000530354 3915 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 RNA5SP431-201ENST00000410312 120 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 TRIM60P16-201ENST00000444048 694 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AL445466.1-201ENST00000448432 357 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 PPIAP7-201ENST00000454070 489 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 RN7SL269P-201ENST00000467795 305 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC105420.1-201ENST00000504389 582 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 OR7E99P-201ENST00000505750 922 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 RNU6-513P-201ENST00000516104 104 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AP000620.1-201ENST00000527147 504 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AL135999.3-201ENST00000610501 812 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AL354950.1-201ENST00000614150 568 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC073488.3-201ENST00000631611 778 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC007603.3-201ENST00000636915 979 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 OR11H2-202ENST00000641517 1085 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 PSG10P-201ENST00000501199 1500 ntBASIC5.17□□□□□ -1.58
COPS3Q9UNS2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPS3Q9UNS2 AC123912.3-201ENST00000600907 1367 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 TCP1P3-201ENST00000414406 1498 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 RPL11P3-201ENST00000395256 523 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC079809.1-201ENST00000415468 276 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 RPL7AP51-201ENST00000422016 760 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC092865.3-201ENST00000425390 1026 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AL354893.1-201ENST00000433735 348 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC015983.1-201ENST00000441577 373 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC083899.1-201ENST00000454465 3819 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC023245.1-201ENST00000468501 517 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 GUSBP9-201ENST00000510138 584 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC111000.6-201ENST00000514471 709 ntBASIC5.16□□□□□ -1.58
COPS3Q9UNS2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.16□□□□□ -1.58
COPS3Q9UNS2 AC007346.1-201ENST00000569208 867 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 246.1 ms