Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 RNU6-316P-201ENST00000391027 107 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 U3.25-201ENST00000391209 220 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC079355.1-201ENST00000421770 223 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AL662874.1-201ENST00000426065 230 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC004129.2-201ENST00000457229 287 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC009120.1-201ENST00000493458 473 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 IGBP1P1-201ENST00000554337 1009 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC022404.1-201ENST00000555320 273 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC007346.2-201ENST00000564816 892 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC009120.7-201ENST00000623452 780 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 AC083837.1-201ENST00000565297 2994 ntBASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLCF1Q9UBD9 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 AC123769.1-201ENST00000530992 3192 ntBASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.15□□□□□ -1.58
CLCF1Q9UBD9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AL159987.1-201ENST00000347911 293 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 SNORA51.1-201ENST00000363243 140 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 MIR143-201ENST00000385300 106 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AL596448.1-201ENST00000415024 392 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AL513325.1-201ENST00000417716 1034 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 Z84478.1-201ENST00000438230 1219 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 DNAJC19P5-201ENST00000443295 316 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 RNU1-88P-201ENST00000459274 128 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC093719.1-201ENST00000480427 441 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 RPS3AP15-201ENST00000483874 781 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 RPL32P33-201ENST00000487023 394 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC074087.1-201ENST00000512059 724 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 RN7SKP67-201ENST00000515905 235 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 SNORA43.3-201ENST00000517240 103 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC139365.2-201ENST00000517972 253 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AP001804.1-201ENST00000526868 919 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC090424.1-201ENST00000535243 736 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AC104695.2-201ENST00000605056 775 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AL049767.1-202ENST00000637826 242 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms