Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC008033.1-201ENST00000216407 1162 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 TAC1-203ENST00000350485 975 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 Y_RNA.89-201ENST00000363031 102 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 SNORA70G-201ENST00000383923 142 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 RNU6-730P-201ENST00000383954 104 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 TNNT3-208ENST00000397301 818 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 RPL5P31-201ENST00000399168 635 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC009413.1-201ENST00000414823 399 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 MTATP6P27-201ENST00000416987 621 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL353777.1-201ENST00000425552 326 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AKR1B1P4-201ENST00000426552 922 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 SLC2A1-AS1-202ENST00000431759 1124 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 BTF3P10-201ENST00000433415 495 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 TECRP2-201ENST00000503270 928 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 PGAM1P1-201ENST00000504014 556 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 LINC01411-202ENST00000506862 744 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 IGHVIII-67-3-201ENST00000517650 232 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 IGHV3-50-201ENST00000522107 317 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 TRBV7-1-201ENST00000547918 380 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC089984.3-201ENST00000552838 363 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 PPIAP6-201ENST00000557078 499 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC093249.3-201ENST00000562444 424 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 FRG2DP-201ENST00000564452 852 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC015911.8-201ENST00000592517 560 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ZIM2-202ENST00000593931 483 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC020908.3-201ENST00000597045 610 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ZNF83-218ENST00000601257 704 ntTSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 PRR13P3-201ENST00000603578 376 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC121334.2-201ENST00000605387 271 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AL356299.2-201ENST00000609218 586 ntTSL 4 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 OR10AB1P-201ENST00000609613 938 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC244472.3-201ENST00000611520 428 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC012100.3-201ENST00000624738 575 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 EEF1A1P8-201ENST00000419025 1388 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 MTND4P12-201ENST00000498999 1377 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 MROH3P-201ENST00000435735 2676 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AC083806.2-201ENST00000617795 2685 ntBASIC9.85□□□□□ -0.83
RTN4Q9NQC3 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC002464.1-201ENST00000569685 1530 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CBX3P1-201ENST00000325243 554 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 MIR219A1-201ENST00000362166 110 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 Y_RNA.70-201ENST00000362886 110 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 VDAC1P2-201ENST00000423609 850 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 KRT18P12-201ENST00000425245 1273 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL589872.1-201ENST00000426602 288 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 MTCYBP45-201ENST00000435243 565 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL389889.1-201ENST00000443747 566 ntTSL 4 BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms