Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MOB1AP1-201ENST00000430903 535 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 OSTCP2-201ENST00000437956 444 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 RPL9P15-201ENST00000491096 532 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 RPL23AP80-201ENST00000495605 424 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC021146.11-201ENST00000503319 491 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC010486.3-201ENST00000511602 785 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC011352.2-201ENST00000514574 1016 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC096661.1-201ENST00000515870 822 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC113191.1-201ENST00000517759 403 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MTCO1P40-201ENST00000574371 625 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC040904.1-201ENST00000590850 223 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 VN1R83P-201ENST00000595685 445 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ZNF92P3-201ENST00000596594 954 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC125494.3-201ENST00000602759 455 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC064807.4-201ENST00000607201 407 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 VN1R74P-201ENST00000613259 503 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC245407.2-201ENST00000614199 451 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 VN1R7P-201ENST00000619242 903 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 OR1N1-202ENST00000619659 939 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC024595.1-201ENST00000623088 387 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC109454.4-201ENST00000623411 649 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 DDX10P2-201ENST00000417796 2614 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC137056.2-201ENST00000624055 1958 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AP002370.1-201ENST00000528055 1602 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 FUNDC2P3-201ENST00000334716 533 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 MIR320B1-201ENST00000390209 79 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 MTND2P18-201ENST00000419962 1030 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC002542.1-201ENST00000440683 193 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 ST13P21-201ENST00000453250 1098 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 RBMY2HP-201ENST00000457961 720 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 RN7SL392P-201ENST00000473024 299 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC093890.1-201ENST00000502554 540 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC092349.1-201ENST00000504903 310 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 snoZ278.1-201ENST00000517059 112 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 MIR4800-201ENST00000537353 80 ntBASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM55Q9BYV6 MIR548Y-201ENST00000582739 110 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms