Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC244502.2-201ENST00000543361 851 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC106730.2-201ENST00000566641 540 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 RBM22P1-201ENST00000578589 1214 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 MIR4480-201ENST00000582492 71 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 MIR132-201ENST00000591554 101 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AL359195.2-201ENST00000623657 4412 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 USP9YP3-201ENST00000434481 1766 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 TMEM75-201ENST00000624314 2165 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AL353763.1-201ENST00000624467 1628 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 U3.36-201ENST00000408418 213 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC015977.1-201ENST00000418887 292 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC007562.1-201ENST00000421819 517 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC023274.2-201ENST00000445264 521 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CASC22-201ENST00000569713 386 ntTSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 uc_338.18-201ENST00000615451 175 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 WBP1LP8-201ENST00000617401 327 ntBASIC8.54□□□□□ -1.04
SCAPERQ9BY12 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.54□□□□□ -1.04
SCAPERQ9BY12 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AC093829.1-201ENST00000506662 1618 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AL360271.1-201ENST00000395679 510 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 RN7SKP151-201ENST00000410230 316 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 DSTNP5-201ENST00000427921 523 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AC006466.1-201ENST00000438721 289 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AC079922.1-201ENST00000443291 359 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 GYG1P1-201ENST00000460864 698 ntBASIC8.53□□□□□ -1.04
SCAPERQ9BY12 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.53□□□□□ -1.04
SCAPERQ9BY12 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.52□□□□□ -1.04
SCAPERQ9BY12 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
SCAPERQ9BY12 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
SCAPERQ9BY12 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 RPS11P7-201ENST00000442125 465 ntBASIC8.52□□□□□ -1.05
SCAPERQ9BY12 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.52□□□□□ -1.05
SCAPERQ9BY12 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 MIR4330-201ENST00000579077 105 ntBASIC8.52□□□□□ -1.05
SCAPERQ9BY12 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SCAPERQ9BY12 AC002090.1-201ENST00000625000 2138 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms