Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX18Q96RF0 PPBPP2-201ENST00000513150 1362 ntBASIC5.8□□□□□ -1.48
SNX18Q96RF0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX18Q96RF0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL359976.1-201ENST00000418655 3528 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 MIR16-2-201ENST00000362117 81 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC019178.1-201ENST00000392337 440 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 RNU2-18P-201ENST00000411224 162 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 SPATA20P1-201ENST00000423089 438 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC092601.1-201ENST00000444526 383 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 OR13K1P-201ENST00000444577 975 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 RPS18P1-201ENST00000447840 458 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL355032.1-201ENST00000472981 438 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC015524.1-201ENST00000491585 472 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 BOLA3P3-201ENST00000505182 232 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC138517.1-201ENST00000515724 568 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 RN7SKP196-201ENST00000516267 345 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 EEF1A1P37-201ENST00000522748 715 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC025811.1-201ENST00000604312 472 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC026741.1-201ENST00000605892 482 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL451064.1-201ENST00000607718 471 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC112503.1-201ENST00000608436 391 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AC008759.3-201ENST00000613300 508 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 AL590396.4-201ENST00000636779 956 ntBASIC5.79□□□□□ -1.48
SNX18Q96RF0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX18Q96RF0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX18Q96RF0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 CR382285.2-201ENST00000624662 1495 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 HSPD1P14-201ENST00000432666 1618 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RN7SKP74-201ENST00000362849 309 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL391419.1-201ENST00000398901 1275 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms