Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS35Q96QK1 AC097063.1-201ENST00000426714 1797 ntBASIC5.82□□□□□ -1.48
VPS35Q96QK1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS35Q96QK1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS35Q96QK1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS35Q96QK1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS35Q96QK1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS35Q96QK1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
VPS35Q96QK1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC005261.2-201ENST00000593427 4258 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 OR7E101P-201ENST00000400428 513 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 SLC20A1P1-201ENST00000413906 956 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 DEFA9P-201ENST00000433042 285 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC096775.1-201ENST00000437724 448 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL512637.1-201ENST00000439523 1231 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC011476.1-201ENST00000466725 307 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL157777.1-201ENST00000468100 304 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 NPM1P28-201ENST00000492269 840 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC114781.3-201ENST00000512083 142 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 HMGN2P36-201ENST00000529541 409 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 ZNF322P1-201ENST00000568013 1209 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC092121.1-201ENST00000569452 202 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AC006484.1-201ENST00000435086 1884 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 AL121839.2-201ENST00000565058 6943 ntBASIC5.81□□□□□ -1.48
VPS35Q96QK1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS35Q96QK1 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC109446.4-201ENST00000623235 2755 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC068870.3-201ENST00000625077 2536 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS35Q96QK1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AL121977.1-201ENST00000401636 979 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 SNORA81-201ENST00000408493 178 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AK4P4-201ENST00000419465 646 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC073410.1-201ENST00000435125 589 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC015983.1-201ENST00000441577 373 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC023141.8-201ENST00000442554 208 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 OSTCP1-201ENST00000455507 450 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC084754.1-201ENST00000463466 464 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 RPS17P15-201ENST00000475609 349 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 MIR2117-201ENST00000516780 80 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS35Q96QK1 EIF4EP5-201ENST00000528228 640 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AP004609.2-201ENST00000532177 190 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC090424.1-201ENST00000535243 736 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS35Q96QK1 AL163952.1-202ENST00000569625 600 ntBASIC5.8□□□□□ -1.48
VPS35Q96QK1 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms