Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6□□□□□ -1.45
RPRD1AQ96P16 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 AL360012.1-201ENST00000602813 131 ntBASIC6□□□□□ -1.45
RPRD1AQ96P16 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6□□□□□ -1.45
RPRD1AQ96P16 ATM-229ENST00000639953 587 ntTSL 5 BASIC6□□□□□ -1.45
RPRD1AQ96P16 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6□□□□□ -1.45
RPRD1AQ96P16 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6□□□□□ -1.45
RPRD1AQ96P16 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RPRD1AQ96P16 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6□□□□□ -1.45
RPRD1AQ96P16 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6□□□□□ -1.45
RPRD1AQ96P16 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6□□□□□ -1.45
RPRD1AQ96P16 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
RPRD1AQ96P16 FBXL21-201ENST00000297158 1305 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC019205.1-201ENST00000421830 730 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AL389925.1-201ENST00000432257 728 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC015983.1-201ENST00000441577 373 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 NENFP3-201ENST00000503735 313 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC015802.2-201ENST00000589690 189 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 ZNF101P1-201ENST00000435701 1720 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.99□□□□□ -1.45
RPRD1AQ96P16 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPRD1AQ96P16 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 RNU1-59P-201ENST00000364829 162 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 PEX12P1-201ENST00000400284 1048 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AL357752.1-201ENST00000412817 349 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC096775.1-201ENST00000437724 448 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC004129.2-201ENST00000457229 287 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC006539.1-201ENST00000481419 501 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 SNORA70.11-201ENST00000515987 138 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 SNORA70.13-201ENST00000516116 138 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC021733.2-201ENST00000518830 497 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC105036.1-201ENST00000566222 271 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AP001496.3-201ENST00000580230 913 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 U1.25-201ENST00000614085 162 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 U1.34-201ENST00000618578 162 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 U1.31-201ENST00000620022 160 ntBASIC5.98□□□□□ -1.45
RPRD1AQ96P16 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 AC010266.2-201ENST00000564741 3255 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms