Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 RN7SKP77-201ENST00000363261 353 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 IPPKP1-201ENST00000422501 768 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AL354766.1-201ENST00000423396 542 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 MED28P3-201ENST00000444288 531 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 CST12P-201ENST00000457644 362 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 RNU1-88P-201ENST00000459274 128 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AL157777.1-201ENST00000468100 304 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 OR5H7P-201ENST00000514084 930 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 GAPDHP62-201ENST00000515313 990 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AC090236.2-201ENST00000587933 1101 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 AL121839.2-201ENST00000565058 6943 ntBASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 GNL2P1-201ENST00000451274 2190 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AL078595.2-201ENST00000605309 1780 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 OR7E25P-201ENST00000344844 931 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 RNA5SP435-201ENST00000364044 108 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 SLC20A1P1-201ENST00000413906 956 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC015983.1-201ENST00000441577 373 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC023141.8-201ENST00000442554 208 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 TRIM60P16-201ENST00000444048 694 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 HLA-DPA3-207ENST00000454398 229 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 GLUD1P3-202ENST00000508551 200 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC021146.10-201ENST00000515628 706 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 GTF2IP11-201ENST00000526931 420 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC129915.3-201ENST00000634128 948 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 OR11H2-202ENST00000641517 1085 ntBASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
C9orf72Q96LT7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
C9orf72Q96LT7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf72Q96LT7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
C9orf72Q96LT7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.9□□□□□ -1.46
C9orf72Q96LT7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms