Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 RNA5SP434-201ENST00000516647 121 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC021269.1-201ENST00000526860 705 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC124891.1-201ENST00000536322 519 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC060780.2-201ENST00000589047 198 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 HMGB1P51-201ENST00000605166 638 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AL355974.3-201ENST00000617383 467 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AL133370.2-201ENST00000619934 439 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC097461.1-201ENST00000568928 2821 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 RLIMP2-201ENST00000427891 1563 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC217777.1-201ENST00000570034 1471 ntBASIC5.71□□□□□ -1.49
VPS33AQ96AX1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
VPS33AQ96AX1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 METTL15P3-201ENST00000415522 1221 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 PSMD8P1-201ENST00000436275 769 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 OR3D1P-201ENST00000438288 955 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL157884.3-201ENST00000448273 1184 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC093325.1-201ENST00000508378 326 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ASNSP4-201ENST00000511103 447 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC090958.1-201ENST00000511122 351 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC063977.7-201ENST00000594454 337 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC084036.1-201ENST00000609190 508 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 GAPDHP41-201ENST00000613707 975 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC104820.1-201ENST00000624183 307 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC119674.1-220ENST00000641502 1048 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AL158152.1-201ENST00000602652 1435 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ADAM24P-201ENST00000398655 2101 ntBASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS33AQ96AX1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS33AQ96AX1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms