Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
AP3S1Q92572 RNA5SP485-201ENST00000365053 119 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC007618.1-201ENST00000366455 732 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AL157702.1-201ENST00000398764 426 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AL132875.1-201ENST00000403623 949 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 RNU2-22P-201ENST00000411266 212 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 SETP10-201ENST00000424368 814 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AP003385.1-201ENST00000426387 893 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AL645936.1-201ENST00000441979 518 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC073909.1-201ENST00000447112 999 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.97□□□□□ -1.61
AP3S1Q92572 COX4I1P2-201ENST00000447446 547 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC021660.1-201ENST00000465006 554 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC023245.1-201ENST00000468501 517 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC093664.1-201ENST00000511779 289 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.97□□□□□ -1.61
AP3S1Q92572 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 MTCYBP13-201ENST00000578634 1093 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC083843.2-201ENST00000568248 6253 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
AP3S1Q92572 AC012254.3-201ENST00000591183 2117 ntBASIC4.97□□□□□ -1.61
AP3S1Q92572 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.97□□□□□ -1.61
AP3S1Q92572 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP3S1Q92572 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
AP3S1Q92572 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
AP3S1Q92572 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP3S1Q92572 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP3S1Q92572 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AP3S1Q92572 RN7SKP74-201ENST00000362849 309 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 RNA5SP326-201ENST00000363209 110 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 RNU1-146P-201ENST00000364015 165 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP3S1Q92572 SNORD56.6-201ENST00000384569 71 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AC003045.1-201ENST00000398779 713 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 COX5BP7-201ENST00000414780 274 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.96□□□□□ -1.62
AP3S1Q92572 HSPD1P12-201ENST00000429127 1069 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 FECHP1-201ENST00000431896 1214 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 PSMD10P2-201ENST00000432890 672 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 DEFA9P-201ENST00000433042 285 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 NANOGP9-201ENST00000439890 892 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 GAPDHP37-201ENST00000442317 968 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 PRPF38AP1-201ENST00000451976 933 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AC245028.2-201ENST00000458673 253 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.96□□□□□ -1.62
AP3S1Q92572 DUTP1-201ENST00000493631 470 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AC135983.3-201ENST00000528049 1226 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AP006437.1-202ENST00000530327 933 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AC124891.1-201ENST00000536322 519 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.96□□□□□ -1.62
AP3S1Q92572 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.96□□□□□ -1.62
AP3S1Q92572 MIR3936-201ENST00000584304 110 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 PRPF19P1-201ENST00000584766 898 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 GAPDHP41-201ENST00000613707 975 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 OR8G7P-201ENST00000616658 848 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
AP3S1Q92572 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AP3S1Q92572 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
AP3S1Q92572 MTCO1P28-201ENST00000574177 1528 ntBASIC4.96□□□□□ -1.62
AP3S1Q92572 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
AP3S1Q92572 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms