Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AC114786.1-201ENST00000512892 1415 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 YES1P1-201ENST00000418510 1628 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 OR2AT2P-201ENST00000413438 905 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 VDAC2P4-201ENST00000452925 711 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AP000547.1-201ENST00000454360 617 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 snoU109.5-201ENST00000516231 132 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 IGLV3-24-201ENST00000517477 197 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 NPM1P45-201ENST00000583151 559 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AC015712.7-201ENST00000615211 635 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AL118522.2-201ENST00000616045 615 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AL390318.1-201ENST00000624564 687 ntBASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD5Q8TDI0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 RNA5SP435-201ENST00000364044 108 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 RN7SKP81-201ENST00000365603 331 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 RNA5SP178-201ENST00000410380 128 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 MEMO1P4-201ENST00000453590 386 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 PPIAP19-201ENST00000486414 492 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 DUTP1-201ENST00000493631 470 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC106872.4-201ENST00000510050 523 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC022826.1-201ENST00000519383 805 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 MIR3176-201ENST00000582210 90 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 HIRAP1-201ENST00000605318 787 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC004477.3-201ENST00000614061 590 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AL157762.1-201ENST00000619612 415 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 MIR6886-201ENST00000619864 61 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC021422.1-201ENST00000621212 473 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC117409.1-201ENST00000470499 1310 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AC007159.1-201ENST00000566529 4706 ntBASIC5.77□□□□□ -1.49
CHD5Q8TDI0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD5Q8TDI0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 RNU1-136P-201ENST00000384181 164 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 SNORA16A-201ENST00000384342 137 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 U3.25-201ENST00000391209 220 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 U3.28-201ENST00000391249 210 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 OR6D1P-201ENST00000436165 939 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 NANOGP9-201ENST00000439890 892 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 H3F3BP1-201ENST00000440551 403 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 RN7SL72P-201ENST00000460697 269 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 AC011411.1-201ENST00000509592 876 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 RN7SKP67-201ENST00000515905 235 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 RBM22P1-201ENST00000578589 1214 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 AC060780.2-201ENST00000589047 198 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 AC018628.1-201ENST00000624147 3819 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 AC083837.1-201ENST00000565297 2994 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.76□□□□□ -1.49
CHD5Q8TDI0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD5Q8TDI0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms