Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 AC092326.2-201ENST00000624772 1561 ntBASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
DEPDC4Q8N2C3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 ASNSP1-204ENST00000641977 1664 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC068860.1-201ENST00000623701 3736 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 EPS15P1-202ENST00000459691 2071 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 OR5E1P-201ENST00000305754 927 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 RN7SKP37-201ENST00000364494 296 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 ANXA2P3-201ENST00000404883 1008 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 FCF1P2-201ENST00000415284 583 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC017078.1-201ENST00000416146 368 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 C1DP2-201ENST00000418167 426 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC231533.2-201ENST00000419045 978 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 FTH1P10-202ENST00000430907 550 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CFL1P8-201ENST00000436148 475 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 RN7SL496P-201ENST00000470372 290 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC027338.2-201ENST00000504382 526 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 SUMO2P17-201ENST00000504438 285 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 HMGB1P29-201ENST00000505659 499 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC108064.1-201ENST00000513791 460 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 OR5AL2P-201ENST00000532185 920 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CYCSP2-201ENST00000558168 301 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 HMGB1P33-201ENST00000563485 527 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC040162.2-201ENST00000573092 157 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MIR5697-201ENST00000578045 78 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 DYNLL1P1-201ENST00000595442 269 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC073534.1-201ENST00000598671 1056 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CARSP1-201ENST00000603171 889 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 PRELID3BP8-201ENST00000604148 295 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC055764.2-201ENST00000610089 670 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC106782.7-201ENST00000624024 418 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AC133555.5-201ENST00000624430 418 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AP003119.3-201ENST00000566747 4192 ntBASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DEPDC4Q8N2C3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 DDX18P4-201ENST00000511690 1966 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 TARS2P1-201ENST00000506124 2041 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms