Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AP000648.1-201ENST00000529682 397 ntBASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 HIRAP1-201ENST00000605318 787 ntBASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 AL031601.1-201ENST00000605702 394 ntBASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 AC093388.1-201ENST00000609166 430 ntBASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC65Q8IXS2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC026523.2-201ENST00000625039 7739 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 BCORP1-203ENST00000513194 5093 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AL357752.1-201ENST00000412817 349 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AK4P4-201ENST00000419465 646 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 RNGTTP1-201ENST00000420965 728 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 RPL24P2-201ENST00000421023 475 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AL035660.1-201ENST00000422041 222 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 PCBP2P1-201ENST00000437262 977 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC090058.1-201ENST00000498788 435 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 GOLGA5P1-201ENST00000507317 980 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC139365.2-201ENST00000517972 253 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 TRIM77BP-201ENST00000524985 1119 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AP001357.1-201ENST00000586304 1053 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 AC010487.1-201ENST00000594408 1172 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 MIR6071-201ENST00000616741 78 ntBASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC65Q8IXS2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC65Q8IXS2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC140134.1-201ENST00000511830 3544 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 RNU1-150P-201ENST00000362491 162 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 OR7E156P-201ENST00000400303 464 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 RNU2-18P-201ENST00000411224 162 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC066692.1-201ENST00000421721 457 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC108751.3-201ENST00000461814 1020 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 RPS23P2-201ENST00000463671 415 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC060775.1-201ENST00000518241 520 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 IGLV3-30-201ENST00000524362 298 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC096996.1-201ENST00000563813 325 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 COX6CP7-201ENST00000597056 208 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 AC000095.2-202ENST00000637415 154 ntBASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC65Q8IXS2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms