Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 PNRC2P1-201ENST00000423940 420 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC005345.1-201ENST00000431868 217 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC245291.3-201ENST00000443400 292 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 TRY2P-201ENST00000448860 689 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC095057.1-201ENST00000507583 168 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 MTCYBP16-201ENST00000509187 1129 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 PPIAP14-201ENST00000577627 496 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 SNORA70D-201ENST00000578836 135 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC002069.2-201ENST00000603580 883 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC005377.1-201ENST00000605126 456 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC018638.7-201ENST00000605836 1114 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL513218.1-201ENST00000606527 391 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 VIS1.1-201ENST00000610517 203 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC068792.1-201ENST00000621354 417 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AL357140.4-201ENST00000636827 412 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC139713.2-210ENST00000641741 992 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC053481.2-202ENST00000582394 1500 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM48Q8IWZ4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AP000641.1-201ENST00000531988 1639 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 RPL12P13-201ENST00000310055 497 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 RN7SKP149-201ENST00000363008 344 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 SNORA70.3-201ENST00000365075 132 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 Y_RNA.505-201ENST00000384489 102 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 Y_RNA.578-201ENST00000390903 88 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 SNORD65-201ENST00000391079 73 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AL590635.1-201ENST00000406314 586 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 UBTFL2-201ENST00000411859 1191 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 TIMM9P2-201ENST00000419324 266 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AL645939.3-201ENST00000435408 225 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 ARL4AP3-201ENST00000441452 574 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC118469.1-201ENST00000442943 488 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 UBBP5-201ENST00000446970 266 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 RPS6P2-201ENST00000454208 705 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC099670.1-201ENST00000455141 783 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 RPL7L1P3-201ENST00000455249 689 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC037479.1-201ENST00000558361 625 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC021483.2-201ENST00000567415 758 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AC138207.8-204ENST00000579588 527 ntBASIC6.52□□□□□ -1.37
TRIM48Q8IWZ4 AP001094.1-201ENST00000579805 193 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms