Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC007346.1-201ENST00000569208 867 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC020916.2-201ENST00000591242 360 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC027334.1-201ENST00000603257 310 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AP001437.1-201ENST00000608783 456 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC016745.2-201ENST00000608834 3443 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RNA5SP110-201ENST00000362638 115 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RNU105B-201ENST00000364478 208 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC083799.1-201ENST00000366451 910 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RNA5SP431-201ENST00000410312 120 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RPS26P38-201ENST00000414476 348 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RN7SL352P-201ENST00000466002 277 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RPL7AP10-201ENST00000481016 791 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RN7SL170P-201ENST00000487098 295 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC011411.1-201ENST00000509592 876 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 PRMT5P1-201ENST00000514351 598 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RN7SKP70-201ENST00000516655 271 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC018552.1-201ENST00000562099 811 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 RN7SL261P-201ENST00000613441 282 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AL512652.1-201ENST00000619006 500 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 AC007159.1-201ENST00000566529 4706 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 PARP4P2-201ENST00000446672 3326 ntBASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP54Q7Z3B4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC092724.1-201ENST00000624623 3397 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL132875.1-201ENST00000403623 949 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL096829.1-201ENST00000413677 457 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 TRIM60P17-201ENST00000415181 719 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 RPS15AP30-201ENST00000420976 390 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC007679.3-201ENST00000434035 414 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 PNKDP1-201ENST00000435914 430 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL353662.1-201ENST00000439099 327 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms