Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SMG1P7-201ENST00000565246 2704 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 RNU6-729P-201ENST00000384399 107 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 MIR7-1-201ENST00000384871 110 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 RPL5P20-201ENST00000403848 896 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 GABARAPL3-201ENST00000412799 354 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SEPT7P8-201ENST00000413308 775 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 EEF1B2P8-201ENST00000414101 671 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 NDUFA5P1-201ENST00000433858 341 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 ELOCP3-201ENST00000439303 348 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL606490.8-201ENST00000441624 319 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC079922.1-201ENST00000443291 359 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 UBBP5-201ENST00000446970 266 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC103563.5-201ENST00000455643 364 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC068228.1-201ENST00000461723 211 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC026688.1-201ENST00000520639 1168 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL731537.2-201ENST00000561565 951 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 OR4H6P-201ENST00000563771 921 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL352984.2-202ENST00000613699 155 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC127024.6-201ENST00000621598 424 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AC022726.2-201ENST00000634673 547 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDLIM3Q53GG5 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
PDLIM3Q53GG5 COX6B1P3-201ENST00000312310 260 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms