Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 RNU2-18P-201ENST00000411224 162 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 OR52N3P-201ENST00000413417 934 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 RPS4XP5-201ENST00000419038 768 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 SETP10-201ENST00000424368 814 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 PSMD10P2-201ENST00000432890 672 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC015983.1-201ENST00000441577 373 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC012512.1-201ENST00000446594 718 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 FTLP8-201ENST00000446770 267 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 MEMO1P4-201ENST00000453590 386 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AP000942.1-201ENST00000463969 747 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC023245.1-201ENST00000468501 517 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 RN7SL790P-201ENST00000474043 298 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC015524.1-201ENST00000491585 472 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AP000859.1-201ENST00000525536 307 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC005632.2-201ENST00000564271 828 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC027796.1-201ENST00000575593 512 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AP005136.2-201ENST00000583253 1049 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 AC145423.1-201ENST00000605712 336 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.15□□□□□ -1.59
CCDC58Q4VC31 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC58Q4VC31 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AP001642.1-201ENST00000624727 2117 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC018717.1-201ENST00000457712 1505 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 ZNF37CP-201ENST00000406795 241 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 RN7SKP286-201ENST00000410894 299 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC211486.3-201ENST00000412694 621 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 GAPDHP19-201ENST00000431768 1005 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 RPS12P17-201ENST00000438591 377 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 NPM1P33-201ENST00000438918 872 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 CBX1P2-201ENST00000453841 458 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 RN7SL393P-201ENST00000463588 296 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 RN7SL502P-201ENST00000481857 290 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC117500.1-201ENST00000497352 755 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC008629.2-201ENST00000503783 483 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 CR383658.1-201ENST00000514609 734 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC006120.1-201ENST00000579375 546 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 FRG1EP-201ENST00000634469 770 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AC117409.1-201ENST00000470499 1310 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.14□□□□□ -1.59
CCDC58Q4VC31 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC58Q4VC31 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC58Q4VC31 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 841.1 ms