Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 RPS4XP14-201ENST00000493072 781 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 RN7SL284P-201ENST00000498823 275 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 MORF4L2P1-201ENST00000503761 858 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 HNRNPRP2-201ENST00000528421 743 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 AL589674.2-201ENST00000604304 337 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 GMCL1P2-201ENST00000605230 823 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 AL512624.1-201ENST00000613638 469 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 RN7SL544P-201ENST00000617232 284 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 RN7SL763P-201ENST00000620922 284 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 AL691477.1-201ENST00000624398 162 ntBASIC6.31□□□□□ -1.4
USP41Q3LFD5 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
USP41Q3LFD5 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP41Q3LFD5 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC139426.3-201ENST00000605648 2059 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 RNA5SP46-201ENST00000362370 120 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 RNA5SP394-201ENST00000364216 119 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 RNU11-201ENST00000387069 134 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 HMGB1P20-201ENST00000402555 677 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 MYL6P5-201ENST00000412707 459 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 MRPL53P1-201ENST00000414323 319 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC127526.2-201ENST00000426436 775 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 SDC4P-201ENST00000453285 601 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 SLC25A51P1-201ENST00000468432 871 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC109481.1-201ENST00000509173 282 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 ATP5LP3-201ENST00000514223 304 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 MIR4505-201ENST00000582238 73 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 AL360012.1-201ENST00000602813 131 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 FO393422.1-201ENST00000603908 708 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 uc_338.26-201ENST00000612659 160 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 AL353684.1-201ENST00000622677 1120 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC087565.3-203ENST00000641018 837 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP41Q3LFD5 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.3□□□□□ -1.4
USP41Q3LFD5 MTCO1P22-201ENST00000604619 1360 ntBASIC6.3□□□□□ -1.4
USP41Q3LFD5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 AL353763.1-201ENST00000624467 1628 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP41Q3LFD5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP41Q3LFD5 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP41Q3LFD5 RNU6-316P-201ENST00000391027 107 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 OR3A2-201ENST00000408891 1076 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 GTF3AP1-201ENST00000416942 1004 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC007562.1-201ENST00000421819 517 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC006455.6-201ENST00000426192 893 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 AK3P5-201ENST00000432033 519 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC079922.1-201ENST00000443291 359 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC023274.2-201ENST00000445264 521 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 RPL7L1P3-201ENST00000455249 689 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AL022319.1-201ENST00000458183 1167 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 RPS17P15-201ENST00000475609 349 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC074087.1-201ENST00000512059 724 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 RNA5SP362-201ENST00000516048 118 ntBASIC6.29□□□□□ -1.4
USP41Q3LFD5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.29□□□□□ -1.4
USP41Q3LFD5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms