Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 SNORA11.5-201ENST00000408163 128 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 RN7SKP240-201ENST00000410583 375 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 NIFKP3-201ENST00000417799 865 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 AC138761.5-201ENST00000433967 325 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 NDUFS5P5-201ENST00000437256 321 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 AL138899.2-201ENST00000439139 499 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 RPS23P2-201ENST00000463671 415 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 AL122020.1-201ENST00000472287 459 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 AC025458.1-201ENST00000506046 166 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 RNA5SP438-201ENST00000516561 112 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 DHFRP1-201ENST00000579682 559 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 AP001153.1-201ENST00000641024 338 ntBASIC5.49□□□□□ -1.53
HMGCS1Q01581 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HMGCS1Q01581 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMGCS1Q01581 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 RN7SKP185-201ENST00000362813 326 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 OR10T1P-201ENST00000424327 947 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AKR1B10P1-201ENST00000425765 942 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 BX323845.3-201ENST00000428215 527 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 RPL32P33-201ENST00000487023 394 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 GLUD1P3-202ENST00000508551 200 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 OR5H7P-201ENST00000514084 930 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 Y_RNA.667-201ENST00000516212 107 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 HMGN2P47-201ENST00000559378 272 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 FAM27E4-201ENST00000605259 342 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AC005618.4-201ENST00000625053 554 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.48□□□□□ -1.53
HMGCS1Q01581 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGCS1Q01581 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMGCS1Q01581 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGCS1Q01581 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGCS1Q01581 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS1Q01581 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.47□□□□□ -1.53
HMGCS1Q01581 Z95114.1-201ENST00000624264 14574 ntBASIC5.47□□□□□ -1.53
HMGCS1Q01581 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGCS1Q01581 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS1Q01581 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS1Q01581 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS1Q01581 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGCS1Q01581 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
HMGCS1Q01581 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HMGCS1Q01581 OR56A4-201ENST00000330728 1209 ntBASIC5.47□□□□□ -1.53
HMGCS1Q01581 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms