Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CL1P78423 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.95□□□□□ -1.62
CX3CL1P78423 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CL1P78423 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
CX3CL1P78423 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC096921.2-201ENST00000561507 1916 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 RNU1-49P-201ENST00000363468 159 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 RN7SKP250-201ENST00000363924 321 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CX3CL1P78423 RNA5SP105-201ENST00000391123 113 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AL391422.1-201ENST00000402155 436 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AL139805.1-201ENST00000407837 289 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 NENFP1-201ENST00000419476 466 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 ELOCP3-201ENST00000439303 348 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC006326.1-201ENST00000445465 787 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 RPS27AP3-201ENST00000453803 454 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 MTND2P6-201ENST00000455337 1030 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 RN7SL552P-201ENST00000462094 276 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 SNRPCP3-201ENST00000474888 476 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AC098818.1-201ENST00000478593 252 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 RNU6-1102P-201ENST00000516149 96 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC006518.1-201ENST00000541449 943 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC090651.1-201ENST00000567865 634 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 RN7SL230P-201ENST00000580835 303 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 ZNF92P2-201ENST00000600543 1059 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 MTCO2P22-201ENST00000603246 681 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC106858.1-201ENST00000637497 429 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CL1P78423 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CL1P78423 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CX3CL1P78423 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 AC092692.1-201ENST00000623625 2595 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 CCNT2P1-201ENST00000423082 1315 ntBASIC4.94□□□□□ -1.62
CX3CL1P78423 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CL1P78423 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CX3CL1P78423 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.93□□□□□ -1.62
CX3CL1P78423 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
CX3CL1P78423 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.93□□□□□ -1.62
CX3CL1P78423 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
CX3CL1P78423 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CX3CL1P78423 SNORA43.1-201ENST00000364863 140 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 RN7SKP186-201ENST00000365371 303 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CL1P78423 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 RN7SKP144-201ENST00000411108 279 ntBASIC4.93□□□□□ -1.62
CX3CL1P78423 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.93□□□□□ -1.62
CX3CL1P78423 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.93□□□□□ -1.62
CX3CL1P78423 THEM7P-201ENST00000419556 672 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms