Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC009804.1-201ENST00000400949 179 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AL357752.1-201ENST00000412817 349 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.64□□□□□ -1.35
CCNA1P78396 RPS27P18-201ENST00000431701 247 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.64□□□□□ -1.35
CCNA1P78396 RPS12P17-201ENST00000438591 377 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.64□□□□□ -1.35
CCNA1P78396 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.64□□□□□ -1.35
CCNA1P78396 AC002075.1-201ENST00000457396 676 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 RNU1-88P-201ENST00000459274 128 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 RPL35AP19-201ENST00000469425 329 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 RN7SL165P-201ENST00000477476 291 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AC068522.1-201ENST00000482895 345 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 RN7SL570P-201ENST00000484405 292 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCNA1P78396 AC074255.1-201ENST00000511259 501 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.64□□□□□ -1.35
CCNA1P78396 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.64□□□□□ -1.35
CCNA1P78396 AC023389.2-201ENST00000580031 955 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AC027334.1-201ENST00000603257 310 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AC010245.2-201ENST00000606908 1167 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 AC005840.5-201ENST00000619166 599 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.64□□□□□ -1.35
CCNA1P78396 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.64□□□□□ -1.35
CCNA1P78396 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
CCNA1P78396 AL592429.1-201ENST00000403909 1473 ntBASIC6.64□□□□□ -1.35
CCNA1P78396 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCNA1P78396 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCNA1P78396 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CCNA1P78396 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.63□□□□□ -1.35
CCNA1P78396 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.63□□□□□ -1.35
CCNA1P78396 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 RNA5SP131-201ENST00000365452 119 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 OR2W4P-201ENST00000406496 926 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.63□□□□□ -1.35
CCNA1P78396 DPPA2P3-201ENST00000411853 655 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.63□□□□□ -1.35
CCNA1P78396 NANOGP4-201ENST00000427230 913 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 OR7E116P-201ENST00000448529 957 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.63□□□□□ -1.35
CCNA1P78396 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.63□□□□□ -1.35
CCNA1P78396 AL603882.1-201ENST00000463059 681 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.63□□□□□ -1.35
CCNA1P78396 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 AC063977.5-201ENST00000601044 974 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 CASC19-222ENST00000641321 1173 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCNA1P78396 AL034546.1-201ENST00000623740 3693 ntBASIC6.63□□□□□ -1.35
CCNA1P78396 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.63□□□□□ -1.35
CCNA1P78396 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCNA1P78396 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCNA1P78396 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 GTF2IP4-201ENST00000453092 2054 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 AC007842.1-201ENST00000597336 2039 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 PABPC1P6-201ENST00000445594 1829 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 AC073429.2-201ENST00000569694 1444 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 AC109780.1-201ENST00000451768 1344 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCNA1P78396 AL159987.1-201ENST00000347911 293 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 HMGA1P8-201ENST00000414130 321 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 AL133173.1-201ENST00000423458 397 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.62□□□□□ -1.35
CCNA1P78396 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.62□□□□□ -1.35
CCNA1P78396 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 AL162739.1-201ENST00000450606 307 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 RN7SL51P-201ENST00000468230 285 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 AC093763.2-201ENST00000505334 1223 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 LDHBP3-201ENST00000514909 822 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.62□□□□□ -1.35
CCNA1P78396 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.62□□□□□ -1.35
CCNA1P78396 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.62□□□□□ -1.35
CCNA1P78396 AC011497.2-201ENST00000600255 639 ntBASIC6.62□□□□□ -1.35
CCNA1P78396 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms