Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNA5SP30-201ENST00000365552 115 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.48□□□□□ -1.21
RIPK4P57078 CHEK2P5-201ENST00000423877 246 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 AC023141.9-201ENST00000458734 412 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 AC087672.1-201ENST00000479876 766 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.48□□□□□ -1.21
RIPK4P57078 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.48□□□□□ -1.21
RIPK4P57078 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.48□□□□□ -1.21
RIPK4P57078 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.48□□□□□ -1.21
RIPK4P57078 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.48□□□□□ -1.21
RIPK4P57078 AC103968.1-201ENST00000557841 573 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 AC090607.5-201ENST00000615692 224 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 MIR6729-201ENST00000618194 65 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 AC005899.7-201ENST00000618199 588 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.48□□□□□ -1.21
RIPK4P57078 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RIPK4P57078 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 AL359955.1-201ENST00000455242 3275 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 NLRP3P1-201ENST00000622303 1785 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 YES1P1-201ENST00000418510 1628 ntBASIC7.48□□□□□ -1.21
RIPK4P57078 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RIPK4P57078 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
RIPK4P57078 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RIPK4P57078 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 AL049634.1-201ENST00000453770 1720 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RIPK4P57078 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.47□□□□□ -1.21
RIPK4P57078 AC114786.1-201ENST00000512892 1415 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RIPK4P57078 RNA5SP242-201ENST00000364171 118 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 AL596448.1-201ENST00000415024 392 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.47□□□□□ -1.21
RIPK4P57078 VN1R21P-201ENST00000426703 765 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.47□□□□□ -1.21
RIPK4P57078 AC009963.4-201ENST00000448535 339 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 RN7SL72P-201ENST00000460697 269 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 RN7SL174P-201ENST00000475578 289 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.47□□□□□ -1.21
RIPK4P57078 RN7SL717P-201ENST00000478343 297 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.47□□□□□ -1.21
RIPK4P57078 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.47□□□□□ -1.21
RIPK4P57078 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.47□□□□□ -1.21
RIPK4P57078 IGBP1P1-201ENST00000554337 1009 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 NPM1P42-201ENST00000560329 862 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.47□□□□□ -1.21
RIPK4P57078 AC233699.1-201ENST00000569955 1168 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RIPK4P57078 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.47□□□□□ -1.21
RIPK4P57078 AP001153.1-201ENST00000641024 338 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RIPK4P57078 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RIPK4P57078 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
RIPK4P57078 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RIPK4P57078 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 LINC02019-201ENST00000608605 2060 ntBASIC7.47□□□□□ -1.21
RIPK4P57078 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.47□□□□□ -1.21
RIPK4P57078 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.46□□□□□ -1.21
RIPK4P57078 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RIPK4P57078 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.46□□□□□ -1.21
RIPK4P57078 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RIPK4P57078 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.46□□□□□ -1.22
RIPK4P57078 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RIPK4P57078 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 RN7SKP206-201ENST00000410823 293 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 RPS6P23-201ENST00000413224 722 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 OR2AT2P-201ENST00000413438 905 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 OR6E1P-201ENST00000414424 923 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.46□□□□□ -1.22
RIPK4P57078 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.46□□□□□ -1.22
RIPK4P57078 IGLV3-24-201ENST00000517477 197 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 AGGF1P7-201ENST00000562369 913 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.46□□□□□ -1.22
RIPK4P57078 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.46□□□□□ -1.22
RIPK4P57078 FO393422.1-201ENST00000603908 708 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 HIRAP1-201ENST00000605318 787 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.46□□□□□ -1.22
RIPK4P57078 AC008115.3-201ENST00000614874 549 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 CU639417.4-201ENST00000623928 207 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RIPK4P57078 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.46□□□□□ -1.22
RIPK4P57078 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.46□□□□□ -1.22
RIPK4P57078 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RIPK4P57078 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RIPK4P57078 AC010329.1-201ENST00000593903 8328 ntBASIC7.46□□□□□ -1.22
RIPK4P57078 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms