Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.26□□□□□ -1.41
HDAC4P56524 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.26□□□□□ -1.41
HDAC4P56524 AL845552.1-201ENST00000556820 323 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
HDAC4P56524 AL049779.3-201ENST00000557141 606 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.26□□□□□ -1.41
HDAC4P56524 AP005119.1-201ENST00000580956 292 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 AC119501.1-201ENST00000603646 475 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 AC007620.3-201ENST00000608131 497 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 AC073592.7-201ENST00000623659 507 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 AC104820.1-201ENST00000624183 307 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HDAC4P56524 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 AC104966.1-201ENST00000467010 1464 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 CR382285.2-201ENST00000624662 1495 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 THAP12P8-201ENST00000447914 2115 ntBASIC6.26□□□□□ -1.41
HDAC4P56524 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HDAC4P56524 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.26□□□□□ -1.41
HDAC4P56524 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HDAC4P56524 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HDAC4P56524 MTCO1P7-201ENST00000419523 1542 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.25□□□□□ -1.41
HDAC4P56524 MTHFD2P5-201ENST00000320415 844 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 DHFRP5-201ENST00000406944 564 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 MYL6P5-201ENST00000412707 459 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.25□□□□□ -1.41
HDAC4P56524 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 AC007679.3-201ENST00000434035 414 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AL445466.1-201ENST00000448432 357 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 MTND3P4-201ENST00000453537 303 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.25□□□□□ -1.41
HDAC4P56524 ACA64.4-201ENST00000459070 127 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC020937.1-201ENST00000519677 1013 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HDAC4P56524 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC026826.3-201ENST00000561747 158 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.25□□□□□ -1.41
HDAC4P56524 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.25□□□□□ -1.41
HDAC4P56524 AL136370.1-201ENST00000608166 691 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AP001437.1-201ENST00000608783 456 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.25□□□□□ -1.41
HDAC4P56524 AC092266.1-201ENST00000610958 165 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AC006213.4-201ENST00000616184 634 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AC003001.2-201ENST00000616294 831 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.25□□□□□ -1.41
HDAC4P56524 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HDAC4P56524 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
HDAC4P56524 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HDAC4P56524 AC016745.2-201ENST00000608834 3443 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.25□□□□□ -1.41
HDAC4P56524 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.25□□□□□ -1.41
HDAC4P56524 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.24□□□□□ -1.41
HDAC4P56524 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HDAC4P56524 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HDAC4P56524 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HDAC4P56524 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.24□□□□□ -1.41
HDAC4P56524 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 AL096800.1-201ENST00000405326 893 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.24□□□□□ -1.41
HDAC4P56524 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.24□□□□□ -1.41
HDAC4P56524 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.24□□□□□ -1.41
HDAC4P56524 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.24□□□□□ -1.41
HDAC4P56524 KCTD9P1-201ENST00000430462 1167 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AL365220.1-201ENST00000432923 399 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 RPSAP40-201ENST00000442343 891 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 CUBNP2-201ENST00000443534 1139 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC104164.1-201ENST00000460282 590 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 RN7SL269P-201ENST00000467795 305 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 AC016687.1-201ENST00000482574 353 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms