Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
AP1S2P56377 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
AP1S2P56377 RNA5SP91-201ENST00000390902 119 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 AC004386.1-201ENST00000393214 761 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 AC099535.1-201ENST00000408928 371 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 AL354890.1-201ENST00000413730 346 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 TRGV5P-201ENST00000419915 354 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.65□□□□□ -1.5
AP1S2P56377 RPL12P18-201ENST00000437175 325 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 OR7E116P-201ENST00000448529 957 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.65□□□□□ -1.5
AP1S2P56377 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.65□□□□□ -1.5
AP1S2P56377 RPL12P39-201ENST00000455456 496 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.65□□□□□ -1.5
AP1S2P56377 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.65□□□□□ -1.5
AP1S2P56377 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.65□□□□□ -1.5
AP1S2P56377 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.65□□□□□ -1.5
AP1S2P56377 AC027369.2-201ENST00000528030 440 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.65□□□□□ -1.5
AP1S2P56377 HMGN2P36-201ENST00000529541 409 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
AP1S2P56377 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.65□□□□□ -1.5
AP1S2P56377 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.65□□□□□ -1.5
AP1S2P56377 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.65□□□□□ -1.5
AP1S2P56377 HIRAP1-201ENST00000605318 787 ntBASIC5.65□□□□□ -1.5
AP1S2P56377 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.65□□□□□ -1.5
AP1S2P56377 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.65□□□□□ -1.5
AP1S2P56377 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AP1S2P56377 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AP1S2P56377 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
AP1S2P56377 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.65□□□□□ -1.51
AP1S2P56377 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
AP1S2P56377 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AP1S2P56377 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
AP1S2P56377 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AP1S2P56377 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
AP1S2P56377 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
AP1S2P56377 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.65□□□□□ -1.51
AP1S2P56377 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.65□□□□□ -1.51
AP1S2P56377 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
AP1S2P56377 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.64□□□□□ -1.51
AP1S2P56377 CASC19-260ENST00000641828 2001 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 RNA5SP273-201ENST00000362484 113 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 RNA5SP477-201ENST00000362639 119 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 RNA5SP433-201ENST00000364491 114 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 SUGT1P2-201ENST00000379452 992 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
AP1S2P56377 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
AP1S2P56377 RN7SKP29-201ENST00000410957 272 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.64□□□□□ -1.51
AP1S2P56377 AK4P4-201ENST00000419465 646 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.64□□□□□ -1.51
AP1S2P56377 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.64□□□□□ -1.51
AP1S2P56377 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.64□□□□□ -1.51
AP1S2P56377 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.64□□□□□ -1.51
AP1S2P56377 AL359839.1-201ENST00000451975 1160 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.64□□□□□ -1.51
AP1S2P56377 Y_RNA.667-201ENST00000516212 107 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.64□□□□□ -1.51
AP1S2P56377 ZNF322P1-201ENST00000568013 1209 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
AP1S2P56377 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.64□□□□□ -1.51
AP1S2P56377 OR51C1P-201ENST00000608504 942 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.64□□□□□ -1.51
AP1S2P56377 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
AP1S2P56377 MFSD8-219ENST00000641228 2559 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
AP1S2P56377 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
AP1S2P56377 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 TCP11X1-202ENST00000622971 1372 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 IFIT1P1-201ENST00000400497 1449 ntBASIC5.64□□□□□ -1.51
AP1S2P56377 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AP1S2P56377 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.63□□□□□ -1.51
AP1S2P56377 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.63□□□□□ -1.51
AP1S2P56377 AC020633.1-201ENST00000468439 2247 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.63□□□□□ -1.51
AP1S2P56377 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AP1S2P56377 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.63□□□□□ -1.51
AP1S2P56377 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP1S2P56377 RNA5SP500-201ENST00000364486 119 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 RN7SKP275-201ENST00000364626 301 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.63□□□□□ -1.51
AP1S2P56377 AL035660.1-201ENST00000422041 222 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 AC126120.1-201ENST00000431082 470 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
AP1S2P56377 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.63□□□□□ -1.51
AP1S2P56377 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.63□□□□□ -1.51
AP1S2P56377 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.63□□□□□ -1.51
AP1S2P56377 AC093166.4-201ENST00000457867 318 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 RPS23P2-201ENST00000463671 415 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 RPS17P15-201ENST00000475609 349 ntBASIC5.63□□□□□ -1.51
AP1S2P56377 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
AP1S2P56377 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms