Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 RN7SKP78-201ENST00000364711 318 ntBASIC5.72□□□□□ -1.49
CDH13P55290 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH13P55290 AC009506.2-201ENST00000420635 840 ntBASIC5.72□□□□□ -1.49
CDH13P55290 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH13P55290 Z82198.3-201ENST00000421145 199 ntBASIC5.72□□□□□ -1.49
CDH13P55290 RPL5P2-201ENST00000429598 854 ntBASIC5.72□□□□□ -1.49
CDH13P55290 MTCO1P57-201ENST00000432182 261 ntBASIC5.72□□□□□ -1.49
CDH13P55290 AC096775.1-201ENST00000437724 448 ntBASIC5.72□□□□□ -1.49
CDH13P55290 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH13P55290 KF459542.1-201ENST00000450908 553 ntBASIC5.72□□□□□ -1.49
CDH13P55290 MTND3P4-201ENST00000453537 303 ntBASIC5.72□□□□□ -1.49
CDH13P55290 CEACAMP11-201ENST00000455211 583 ntBASIC5.72□□□□□ -1.49
CDH13P55290 AC004129.2-201ENST00000457229 287 ntBASIC5.72□□□□□ -1.49
CDH13P55290 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH13P55290 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.72□□□□□ -1.49
CDH13P55290 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 RN7SL284P-201ENST00000498823 275 ntBASIC5.72□□□□□ -1.49
CDH13P55290 AC113367.2-201ENST00000505749 160 ntBASIC5.72□□□□□ -1.49
CDH13P55290 AC112484.3-201ENST00000505910 329 ntBASIC5.72□□□□□ -1.49
CDH13P55290 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH13P55290 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH13P55290 AP000619.2-201ENST00000546014 969 ntBASIC5.72□□□□□ -1.49
CDH13P55290 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH13P55290 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH13P55290 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH13P55290 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH13P55290 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH13P55290 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH13P55290 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH13P55290 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH13P55290 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH13P55290 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH13P55290 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH13P55290 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 CASC19-260ENST00000641828 2001 ntBASIC5.72□□□□□ -1.49
CDH13P55290 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 FBXL21-201ENST00000297158 1305 ntBASIC5.72□□□□□ -1.49
CDH13P55290 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH13P55290 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH13P55290 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDH13P55290 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CDH13P55290 AC008627.1-201ENST00000517511 1704 ntBASIC5.71□□□□□ -1.49
CDH13P55290 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
CDH13P55290 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH13P55290 SAMM50P1-201ENST00000455403 1399 ntBASIC5.71□□□□□ -1.5
CDH13P55290 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH13P55290 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH13P55290 RNA5SP279-201ENST00000365513 117 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH13P55290 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH13P55290 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH13P55290 TRIM60P13-201ENST00000432350 1283 ntBASIC5.71□□□□□ -1.5
CDH13P55290 NDUFA5P1-201ENST00000433858 341 ntBASIC5.71□□□□□ -1.5
CDH13P55290 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 AC023245.1-201ENST00000468501 517 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AC007688.1-201ENST00000475592 759 ntBASIC5.71□□□□□ -1.5
CDH13P55290 PDCL3P4-201ENST00000489621 720 ntBASIC5.71□□□□□ -1.5
CDH13P55290 RN7SL362P-201ENST00000494228 267 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AL158068.1-201ENST00000506116 616 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH13P55290 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH13P55290 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH13P55290 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH13P55290 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH13P55290 AP005119.1-201ENST00000580956 292 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AL583832.1-201ENST00000603227 784 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AC239803.2-201ENST00000610161 430 ntBASIC5.71□□□□□ -1.5
CDH13P55290 uc_338.31-201ENST00000615595 186 ntBASIC5.71□□□□□ -1.5
CDH13P55290 MIR6721-201ENST00000617181 87 ntBASIC5.71□□□□□ -1.5
CDH13P55290 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 FAM27E2-201ENST00000619668 403 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AL118508.4-201ENST00000624142 1176 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AP000550.3-201ENST00000637734 379 ntBASIC5.71□□□□□ -1.5
CDH13P55290 OR11H2-202ENST00000641517 1085 ntBASIC5.71□□□□□ -1.5
CDH13P55290 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH13P55290 CAP1P2-201ENST00000417455 1409 ntBASIC5.71□□□□□ -1.5
CDH13P55290 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH13P55290 AL161912.4-201ENST00000623889 2468 ntBASIC5.71□□□□□ -1.5
CDH13P55290 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH13P55290 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH13P55290 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH13P55290 AC012254.3-201ENST00000591183 2117 ntBASIC5.71□□□□□ -1.5
CDH13P55290 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH13P55290 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH13P55290 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH13P55290 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH13P55290 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms