Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.75□□□□□ -1.49
RPA3P35244 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.75□□□□□ -1.49
RPA3P35244 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RPA3P35244 SELENOWP1-201ENST00000322792 252 ntBASIC5.75□□□□□ -1.49
RPA3P35244 RNFT1P3-201ENST00000340898 1052 ntBASIC5.75□□□□□ -1.49
RPA3P35244 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.75□□□□□ -1.49
RPA3P35244 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.75□□□□□ -1.49
RPA3P35244 RPL35AP3-201ENST00000414680 288 ntBASIC5.75□□□□□ -1.49
RPA3P35244 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 AC009784.1-201ENST00000426484 460 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 AL359265.1-201ENST00000440296 795 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.75□□□□□ -1.49
RPA3P35244 CST12P-201ENST00000457644 362 ntBASIC5.75□□□□□ -1.49
RPA3P35244 RN7SL269P-201ENST00000467795 305 ntBASIC5.75□□□□□ -1.49
RPA3P35244 RPS7P6-201ENST00000485777 579 ntBASIC5.75□□□□□ -1.49
RPA3P35244 RPS17P5-201ENST00000498293 408 ntBASIC5.75□□□□□ -1.49
RPA3P35244 SCARNA18.1-201ENST00000516330 83 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AP004609.2-201ENST00000532177 190 ntBASIC5.75□□□□□ -1.49
RPA3P35244 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.75□□□□□ -1.49
RPA3P35244 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.75□□□□□ -1.49
RPA3P35244 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.75□□□□□ -1.49
RPA3P35244 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.75□□□□□ -1.49
RPA3P35244 AC134669.1-201ENST00000581275 672 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC079315.1-201ENST00000602952 623 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 AC145423.1-201ENST00000605712 336 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AL022394.1-201ENST00000606979 292 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC108673.3-201ENST00000609183 335 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AL162574.1-201ENST00000615702 950 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC129778.1-202ENST00000623812 261 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AL591379.1-207ENST00000635982 261 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.75□□□□□ -1.49
RPA3P35244 OR11H2-202ENST00000641517 1085 ntBASIC5.75□□□□□ -1.49
RPA3P35244 AC119674.1-217ENST00000641942 1086 ntBASIC5.75□□□□□ -1.49
RPA3P35244 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RPA3P35244 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.75□□□□□ -1.49
RPA3P35244 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RPA3P35244 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.75□□□□□ -1.49
RPA3P35244 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.74□□□□□ -1.49
RPA3P35244 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
RPA3P35244 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.74□□□□□ -1.49
RPA3P35244 AC096921.1-201ENST00000411661 375 ntBASIC5.74□□□□□ -1.49
RPA3P35244 RPS14P4-201ENST00000415880 418 ntBASIC5.74□□□□□ -1.49
RPA3P35244 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 GAPDHP75-201ENST00000433910 943 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 MEMO1P4-201ENST00000453590 386 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 DEFB109A-201ENST00000482450 265 ntBASIC5.74□□□□□ -1.49
RPA3P35244 PFN1P8-201ENST00000497012 543 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC025458.1-201ENST00000506046 166 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 BCAS2P1-201ENST00000528022 632 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.74□□□□□ -1.49
RPA3P35244 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.74□□□□□ -1.49
RPA3P35244 AC019322.1-201ENST00000571869 389 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC090286.3-201ENST00000573133 187 ntBASIC5.74□□□□□ -1.49
RPA3P35244 MIR4776-2-201ENST00000580204 80 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.74□□□□□ -1.49
RPA3P35244 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.74□□□□□ -1.49
RPA3P35244 AL499605.1-201ENST00000604628 403 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AL136131.3-201ENST00000607600 188 ntBASIC5.74□□□□□ -1.49
RPA3P35244 MIR6793-201ENST00000612376 63 ntBASIC5.74□□□□□ -1.49
RPA3P35244 AC021766.1-201ENST00000624404 741 ntBASIC5.74□□□□□ -1.49
RPA3P35244 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RPA3P35244 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 AF287957.1-201ENST00000607368 1595 ntBASIC5.74□□□□□ -1.49
RPA3P35244 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RPA3P35244 HSPD1P7-201ENST00000447985 1686 ntBASIC5.74□□□□□ -1.49
RPA3P35244 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.74□□□□□ -1.49
RPA3P35244 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms