Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA3P32297 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.13□□□□□ -1.43
CHRNA3P32297 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.12□□□□□ -1.43
CHRNA3P32297 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CHRNA3P32297 OR7E25P-201ENST00000344844 931 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CHRNA3P32297 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 LYPLA1P3-201ENST00000402650 695 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 AL096711.1-201ENST00000404780 554 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.12□□□□□ -1.43
CHRNA3P32297 AL354766.1-201ENST00000423396 542 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 AL389925.1-201ENST00000432257 728 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 AC138761.5-201ENST00000433967 325 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 RBPJP7-201ENST00000442803 1447 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 VN1R96P-201ENST00000446052 858 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 AL445466.1-201ENST00000448432 357 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 RBPJP5-201ENST00000449433 1447 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 GNL2P1-201ENST00000451274 2190 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA3P32297 ACA64.1-201ENST00000459171 127 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 AC006539.1-201ENST00000481419 501 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 Y_RNA.667-201ENST00000516212 107 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 SCARNA18.1-201ENST00000516330 83 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 RNA5SP438-201ENST00000516561 112 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.12□□□□□ -1.43
CHRNA3P32297 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.12□□□□□ -1.43
CHRNA3P32297 AC068305.2-201ENST00000550567 1205 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.12□□□□□ -1.43
CHRNA3P32297 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.12□□□□□ -1.43
CHRNA3P32297 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA3P32297 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA3P32297 MIR6809-201ENST00000612189 116 ntBASIC6.12□□□□□ -1.43
CHRNA3P32297 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA3P32297 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
CHRNA3P32297 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA3P32297 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA3P32297 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA3P32297 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA3P32297 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AF287957.1-201ENST00000607368 1595 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA3P32297 RN7SKP78-201ENST00000364711 318 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 SLC20A1P1-201ENST00000413906 956 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.11□□□□□ -1.43
CHRNA3P32297 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 CDY8P-201ENST00000428380 1279 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 RPS7P3-201ENST00000443360 580 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 CDY20P-201ENST00000447528 1279 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC084754.1-201ENST00000463466 464 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 RN7SL193P-201ENST00000491708 276 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 RNA5SP271-201ENST00000516700 88 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 RN7SKP5-201ENST00000517045 272 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.11□□□□□ -1.43
CHRNA3P32297 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC110056.1-201ENST00000525759 911 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.11□□□□□ -1.43
CHRNA3P32297 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA3P32297 MIR6793-201ENST00000612376 63 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AC241377.1-201ENST00000619797 406 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AC009120.7-201ENST00000623452 780 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA3P32297 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA3P32297 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.11□□□□□ -1.43
CHRNA3P32297 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA3P32297 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA3P32297 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms