Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SLC6A4P31645 RNU1-134P-201ENST00000362935 165 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 RN7SKP275-201ENST00000364626 301 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 MTND4LP13-201ENST00000425022 298 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.36□□□□□ -1.39
SLC6A4P31645 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 AC068228.1-201ENST00000461723 211 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 RN7SL221P-201ENST00000466190 281 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.36□□□□□ -1.39
SLC6A4P31645 NPM1P29-201ENST00000483112 803 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AC112518.2-201ENST00000508565 425 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AC111000.6-201ENST00000514471 709 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.36□□□□□ -1.39
SLC6A4P31645 RNA5SP400-201ENST00000517155 111 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AC010376.1-201ENST00000522101 334 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 RNU4ATAC-201ENST00000580972 127 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.36□□□□□ -1.39
SLC6A4P31645 AC107993.1-201ENST00000591343 684 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.36□□□□□ -1.39
SLC6A4P31645 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.36□□□□□ -1.39
SLC6A4P31645 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 AC091193.1-201ENST00000604640 448 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 RNU6-1192P-201ENST00000612197 107 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 RNU6-489P-201ENST00000618289 107 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AL137067.2-201ENST00000621202 131 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AC093875.1-201ENST00000623688 504 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AC068057.2-201ENST00000624047 895 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 AL590396.4-201ENST00000636779 956 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.36□□□□□ -1.39
SLC6A4P31645 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.36□□□□□ -1.39
SLC6A4P31645 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.36□□□□□ -1.39
SLC6A4P31645 MAPK10-270ENST00000641102 3538 ntBASIC6.36□□□□□ -1.39
SLC6A4P31645 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.36□□□□□ -1.39
SLC6A4P31645 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.36□□□□□ -1.39
SLC6A4P31645 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SLC6A4P31645 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SLC6A4P31645 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC119674.1-202ENST00000641333 1860 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 RAD1P1-201ENST00000231383 813 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SLC6A4P31645 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.35□□□□□ -1.39
SLC6A4P31645 RNA5SP156-201ENST00000410250 110 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 RANP4-201ENST00000413361 655 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 RAB9AP4-201ENST00000415230 609 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.35□□□□□ -1.39
SLC6A4P31645 VN1R31P-201ENST00000417498 730 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC009506.2-201ENST00000420635 840 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 MTCO2P23-201ENST00000425216 680 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.35□□□□□ -1.39
SLC6A4P31645 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 CETN4P-201ENST00000432407 469 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SLC6A4P31645 RPL7P33-201ENST00000444159 742 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 MTATP6P26-201ENST00000445926 662 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 RAB28P3-201ENST00000448325 597 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC104164.3-201ENST00000467363 1258 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 RN7SL205P-201ENST00000490174 284 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC093534.1-201ENST00000504977 132 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.35□□□□□ -1.39
SLC6A4P31645 PRELID3BP5-201ENST00000508612 460 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC121161.1-201ENST00000510606 652 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.35□□□□□ -1.39
SLC6A4P31645 RNA5SP340-201ENST00000517132 107 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC093014.1-201ENST00000548926 724 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.35□□□□□ -1.39
SLC6A4P31645 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.35□□□□□ -1.39
SLC6A4P31645 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC008507.3-201ENST00000585753 472 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AC011497.2-201ENST00000600255 639 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 AL021368.3-201ENST00000607119 578 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 Z99129.2-201ENST00000619967 314 ntBASIC6.35□□□□□ -1.39
SLC6A4P31645 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.35□□□□□ -1.39
SLC6A4P31645 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.35□□□□□ -1.39
SLC6A4P31645 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms