Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD40P25942 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CD40P25942 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.97□□□□□ -1.45
CD40P25942 AL096816.1-201ENST00000623300 2920 ntBASIC5.97□□□□□ -1.45
CD40P25942 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CD40P25942 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD40P25942 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CD40P25942 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
CD40P25942 AL512329.1-201ENST00000404600 1592 ntBASIC5.97□□□□□ -1.45
CD40P25942 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.97□□□□□ -1.45
CD40P25942 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CD40P25942 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CD40P25942 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.96□□□□□ -1.45
CD40P25942 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CD40P25942 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.96□□□□□ -1.45
CD40P25942 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC5.96□□□□□ -1.45
CD40P25942 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC5.96□□□□□ -1.45
CD40P25942 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.96□□□□□ -1.45
CD40P25942 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.96□□□□□ -1.45
CD40P25942 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.96□□□□□ -1.45
CD40P25942 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CD40P25942 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.96□□□□□ -1.45
CD40P25942 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CD40P25942 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 AL023806.3-201ENST00000638502 2704 ntBASIC5.96□□□□□ -1.46
CD40P25942 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.96□□□□□ -1.46
CD40P25942 RNU6-1339P-201ENST00000363574 91 ntBASIC5.96□□□□□ -1.46
CD40P25942 RN7SKP47-201ENST00000365347 328 ntBASIC5.96□□□□□ -1.46
CD40P25942 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CD40P25942 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.96□□□□□ -1.46
CD40P25942 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 AL353133.1-201ENST00000407695 401 ntBASIC5.96□□□□□ -1.46
CD40P25942 AL773545.3-201ENST00000414297 706 ntBASIC5.96□□□□□ -1.46
CD40P25942 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.96□□□□□ -1.46
CD40P25942 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.96□□□□□ -1.46
CD40P25942 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 DEFA9P-201ENST00000433042 285 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC245047.1-201ENST00000433276 873 ntBASIC5.96□□□□□ -1.46
CD40P25942 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 E2F6P3-201ENST00000441743 743 ntBASIC5.96□□□□□ -1.46
CD40P25942 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.96□□□□□ -1.46
CD40P25942 AC073387.1-201ENST00000453261 709 ntBASIC5.96□□□□□ -1.46
CD40P25942 MRPL42P4-201ENST00000453267 443 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.96□□□□□ -1.46
CD40P25942 RN7SL502P-201ENST00000481857 290 ntBASIC5.96□□□□□ -1.46
CD40P25942 RPS4XP23-201ENST00000487801 237 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 SSX8-201ENST00000506270 579 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC026782.2-201ENST00000510845 636 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.96□□□□□ -1.46
CD40P25942 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 AC084337.1-201ENST00000524809 686 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 AC092747.2-201ENST00000545069 983 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 RPL3P13-201ENST00000550415 216 ntBASIC5.96□□□□□ -1.46
CD40P25942 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.96□□□□□ -1.46
CD40P25942 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.96□□□□□ -1.46
CD40P25942 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 ULK4P1-202ENST00000565174 503 ntBASIC5.96□□□□□ -1.46
CD40P25942 MIR3912-201ENST00000577566 105 ntBASIC5.96□□□□□ -1.46
CD40P25942 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.96□□□□□ -1.46
CD40P25942 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 RN7SL66P-201ENST00000582099 264 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC020914.7-201ENST00000594477 545 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC036176.3-201ENST00000602456 418 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC124312.4-201ENST00000605533 310 ntBASIC5.96□□□□□ -1.46
CD40P25942 AL354976.1-201ENST00000613843 387 ntBASIC5.96□□□□□ -1.46
CD40P25942 HTR1DP1-201ENST00000616500 888 ntBASIC5.96□□□□□ -1.46
CD40P25942 AC048341.3-201ENST00000619323 491 ntBASIC5.96□□□□□ -1.46
CD40P25942 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.96□□□□□ -1.46
CD40P25942 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.96□□□□□ -1.46
CD40P25942 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.96□□□□□ -1.46
CD40P25942 SGO1P2-201ENST00000429458 1589 ntBASIC5.96□□□□□ -1.46
CD40P25942 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.96□□□□□ -1.46
CD40P25942 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 AL359091.1-201ENST00000449048 1734 ntBASIC5.96□□□□□ -1.46
CD40P25942 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
CD40P25942 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.96□□□□□ -1.46
CD40P25942 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD40P25942 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.96□□□□□ -1.46
CD40P25942 AL137100.1-201ENST00000556703 1620 ntBASIC5.96□□□□□ -1.46
CD40P25942 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms