Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 SEPT7P8-201ENST00000413308 775 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 USP24P1-201ENST00000433802 779 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 BX679664.2-201ENST00000439282 283 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 OR6C72P-201ENST00000451403 892 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 MORF4L2P1-201ENST00000503761 858 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 RN7SKP34-201ENST00000516142 244 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 NPM1P52-201ENST00000518264 846 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC025857.1-201ENST00000525252 377 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC027026.1-201ENST00000532323 742 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC090424.1-201ENST00000535243 736 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AL121594.2-201ENST00000541658 472 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC011270.1-201ENST00000558606 583 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 TXNP4-201ENST00000575018 310 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 MIR6793-201ENST00000612376 63 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC020633.1-201ENST00000468439 2247 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 AC007342.5-201ENST00000571340 2142 ntBASIC5.95□□□□□ -1.46
HLA-DPA1P20036 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DPA1P20036 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 RNFT1P3-201ENST00000340898 1052 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 MIR137-201ENST00000385223 102 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AC096775.1-201ENST00000437724 448 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 RPS12P17-201ENST00000438591 377 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 MIR2117-201ENST00000516780 80 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 RNA5SP340-201ENST00000517132 107 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AP002981.1-201ENST00000517692 975 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 WBP1LP3-201ENST00000523033 208 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 NPM1P42-201ENST00000560329 862 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 GARSP1-201ENST00000570895 719 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 MIR4776-2-201ENST00000580204 80 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AP001267.4-201ENST00000602598 545 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.94□□□□□ -1.46
HLA-DPA1P20036 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HLA-DPA1P20036 AC027088.4-201ENST00000611559 1947 ntBASIC5.93□□□□□ -1.46
HLA-DPA1P20036 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DPA1P20036 AC004386.1-201ENST00000393214 761 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms