Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9.66□□□□□ -0.86
TOP2AP11388 TMEM183AP1-205ENST00000432739 290 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 RPL12P39-201ENST00000455456 496 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 AC095055.1-201ENST00000603472 1113 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOP2AP11388 AC002090.1-201ENST00000625000 2138 ntBASIC9.66□□□□□ -0.86
TOP2AP11388 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC9.66□□□□□ -0.86
TOP2AP11388 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC9.66□□□□□ -0.86
TOP2AP11388 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
TOP2AP11388 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
TOP2AP11388 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TOP2AP11388 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 AL121886.1-201ENST00000358609 435 ntBASIC9.65□□□□□ -0.86
TOP2AP11388 SNORD1C-201ENST00000363315 78 ntBASIC9.65□□□□□ -0.86
TOP2AP11388 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC9.65□□□□□ -0.86
TOP2AP11388 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC9.65□□□□□ -0.86
TOP2AP11388 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC9.65□□□□□ -0.86
TOP2AP11388 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.65□□□□□ -0.86
TOP2AP11388 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC9.65□□□□□ -0.86
TOP2AP11388 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.65□□□□□ -0.86
TOP2AP11388 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC9.65□□□□□ -0.86
TOP2AP11388 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.65□□□□□ -0.86
TOP2AP11388 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.65□□□□□ -0.86
TOP2AP11388 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOP2AP11388 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
TOP2AP11388 KCNMB3P1-202ENST00000493696 3389 ntBASIC9.65□□□□□ -0.87
TOP2AP11388 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TOP2AP11388 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
TOP2AP11388 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC9.65□□□□□ -0.87
TOP2AP11388 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.87
TOP2AP11388 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
TOP2AP11388 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.87
TOP2AP11388 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 SNURFL-201ENST00000309296 343 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 RN7SKP126-201ENST00000411143 300 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 AL139128.1-201ENST00000413921 941 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 AL360081.1-201ENST00000428299 555 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 GSTM5P1-201ENST00000434751 660 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC9.64□□□□□ -0.87
TOP2AP11388 AC105233.1-201ENST00000498840 781 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 RNA5SP373-201ENST00000517271 95 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.64□□□□□ -0.87
TOP2AP11388 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC9.64□□□□□ -0.87
TOP2AP11388 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
TOP2AP11388 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
TOP2AP11388 AC009962.1-201ENST00000567327 3813 ntBASIC9.64□□□□□ -0.87
TOP2AP11388 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
TOP2AP11388 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.64□□□□□ -0.87
TOP2AP11388 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOP2AP11388 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.63□□□□□ -0.87
TOP2AP11388 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.63□□□□□ -0.87
TOP2AP11388 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOP2AP11388 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
TOP2AP11388 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 AL121977.1-201ENST00000401636 979 ntBASIC9.63□□□□□ -0.87
TOP2AP11388 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOP2AP11388 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC9.63□□□□□ -0.87
TOP2AP11388 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOP2AP11388 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC9.63□□□□□ -0.87
TOP2AP11388 RPL17P2-201ENST00000491913 451 ntBASIC9.63□□□□□ -0.87
TOP2AP11388 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.63□□□□□ -0.87
TOP2AP11388 AC092490.3-201ENST00000545370 572 ntBASIC9.63□□□□□ -0.87
TOP2AP11388 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC9.63□□□□□ -0.87
TOP2AP11388 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.63□□□□□ -0.87
TOP2AP11388 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 HSPD1P7-201ENST00000447985 1686 ntBASIC9.63□□□□□ -0.87
TOP2AP11388 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TOP2AP11388 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC9.63□□□□□ -0.87
TOP2AP11388 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TOP2AP11388 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TOP2AP11388 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.62□□□□□ -0.87
TOP2AP11388 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 EI24P4-201ENST00000423683 1078 ntBASIC9.62□□□□□ -0.87
TOP2AP11388 RHOT1P3-201ENST00000436571 331 ntBASIC9.62□□□□□ -0.87
TOP2AP11388 ATP5LP5-201ENST00000483050 299 ntBASIC9.62□□□□□ -0.87
TOP2AP11388 AC137768.1-201ENST00000549998 553 ntBASIC9.62□□□□□ -0.87
TOP2AP11388 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.62□□□□□ -0.87
TOP2AP11388 AP000769.2-201ENST00000602344 396 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms