Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOP1P11387 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
TOP1P11387 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.78□□□□□ -1.32
TOP1P11387 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
TOP1P11387 RPS2P45-201ENST00000469997 2057 ntBASIC6.78□□□□□ -1.32
TOP1P11387 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOP1P11387 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TOP1P11387 AC004656.1-201ENST00000568479 4951 ntBASIC6.78□□□□□ -1.32
TOP1P11387 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP1P11387 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP1P11387 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP1P11387 RN7SKP81-201ENST00000365603 331 ntBASIC6.78□□□□□ -1.32
TOP1P11387 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.78□□□□□ -1.32
TOP1P11387 RNA5SP178-201ENST00000410380 128 ntBASIC6.78□□□□□ -1.32
TOP1P11387 SDHDP6-201ENST00000414693 480 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 RPL34P3-201ENST00000421454 338 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.78□□□□□ -1.32
TOP1P11387 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TOP1P11387 AL022331.1-201ENST00000429025 477 ntBASIC6.78□□□□□ -1.32
TOP1P11387 HMGB3P24-201ENST00000433260 622 ntBASIC6.78□□□□□ -1.32
TOP1P11387 USP24P1-201ENST00000433802 779 ntBASIC6.78□□□□□ -1.32
TOP1P11387 OSTCP1-201ENST00000455507 450 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC004129.2-201ENST00000457229 287 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.78□□□□□ -1.32
TOP1P11387 RPS23P6-201ENST00000466136 431 ntBASIC6.78□□□□□ -1.32
TOP1P11387 RPSAP37-201ENST00000470913 821 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.78□□□□□ -1.32
TOP1P11387 AC022215.1-201ENST00000481770 362 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.78□□□□□ -1.32
TOP1P11387 AC139365.2-201ENST00000517972 253 ntBASIC6.78□□□□□ -1.32
TOP1P11387 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.78□□□□□ -1.32
TOP1P11387 DPPA2P4-201ENST00000563717 878 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.78□□□□□ -1.32
TOP1P11387 AC010547.6-201ENST00000571789 193 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.78□□□□□ -1.32
TOP1P11387 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.78□□□□□ -1.32
TOP1P11387 AC000095.2-202ENST00000637415 154 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AC087565.3-203ENST00000641018 837 ntBASIC6.78□□□□□ -1.32
TOP1P11387 AP001153.1-201ENST00000641024 338 ntBASIC6.78□□□□□ -1.32
TOP1P11387 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TOP1P11387 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP1P11387 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP1P11387 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TOP1P11387 AC120036.2-201ENST00000509729 1474 ntBASIC6.78□□□□□ -1.32
TOP1P11387 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOP1P11387 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.77□□□□□ -1.32
TOP1P11387 FBXL21-201ENST00000297158 1305 ntBASIC6.77□□□□□ -1.32
TOP1P11387 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TOP1P11387 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOP1P11387 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOP1P11387 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TOP1P11387 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TOP1P11387 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOP1P11387 AC087752.1-201ENST00000391360 558 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AC092642.1-201ENST00000392417 425 ntBASIC6.77□□□□□ -1.33
TOP1P11387 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TOP1P11387 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AL512422.1-201ENST00000407033 553 ntBASIC6.77□□□□□ -1.33
TOP1P11387 RN7SKP17-201ENST00000411242 351 ntBASIC6.77□□□□□ -1.33
TOP1P11387 NME1P1-201ENST00000420914 382 ntBASIC6.77□□□□□ -1.33
TOP1P11387 GAPDHP48-201ENST00000436626 961 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AL391987.1-201ENST00000441025 200 ntBASIC6.77□□□□□ -1.33
TOP1P11387 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOP1P11387 LRRC37A14P-201ENST00000452297 462 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AC002075.1-201ENST00000457396 676 ntBASIC6.77□□□□□ -1.33
TOP1P11387 RPS27AP2-201ENST00000457576 465 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AC009120.1-201ENST00000493458 473 ntBASIC6.77□□□□□ -1.33
TOP1P11387 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.77□□□□□ -1.33
TOP1P11387 AC112191.2-201ENST00000522428 333 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.77□□□□□ -1.33
TOP1P11387 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.77□□□□□ -1.33
TOP1P11387 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.77□□□□□ -1.33
TOP1P11387 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.77□□□□□ -1.33
TOP1P11387 AC020978.7-201ENST00000575953 1187 ntBASIC6.77□□□□□ -1.33
TOP1P11387 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.77□□□□□ -1.33
TOP1P11387 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.77□□□□□ -1.33
TOP1P11387 RNA5SP440-201ENST00000612665 119 ntBASIC6.77□□□□□ -1.33
TOP1P11387 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.77□□□□□ -1.33
TOP1P11387 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.77□□□□□ -1.33
TOP1P11387 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
TOP1P11387 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.77□□□□□ -1.33
TOP1P11387 MFSD8-219ENST00000641228 2559 ntBASIC6.77□□□□□ -1.33
TOP1P11387 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOP1P11387 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TOP1P11387 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TOP1P11387 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TOP1P11387 AL161756.3-201ENST00000641216 2071 ntBASIC6.77□□□□□ -1.33
TOP1P11387 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.76□□□□□ -1.33
TOP1P11387 AC117409.1-201ENST00000470499 1310 ntBASIC6.76□□□□□ -1.33
TOP1P11387 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.76□□□□□ -1.33
TOP1P11387 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms