Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 RNU6-1214P-201ENST00000363650 109 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 MRPS6P2-201ENST00000381143 370 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AL035422.1-201ENST00000414193 397 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 RPS7P12-201ENST00000422385 582 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC090018.1-201ENST00000434369 367 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC021146.8-201ENST00000507455 733 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 ZNF519P4-201ENST00000514008 125 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 SNORA3.4-201ENST00000515969 96 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 IGLVIV-64-201ENST00000518581 301 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 CYCSP25-201ENST00000525280 316 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 HIRAP1-201ENST00000605318 787 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC013468.1-201ENST00000608680 598 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AP002345.2-201ENST00000609961 904 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC105227.2-201ENST00000615075 605 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AC131159.1-201ENST00000621854 213 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 AL139805.2-201ENST00000455305 2433 ntBASIC8.88□□□□□ -0.99
CSB-PGBD3P0DP91 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 SNORD56.4-201ENST00000363883 71 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RN7SKP275-201ENST00000364626 301 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RNU6-517P-201ENST00000384362 110 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC006366.1-201ENST00000422002 759 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RPS29P14-201ENST00000431518 171 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 UBE2D3P4-201ENST00000441973 436 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RPL5P7-201ENST00000444235 813 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RN7SL382P-201ENST00000482631 282 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RPS4XP23-201ENST00000487801 237 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 RPS12P31-201ENST00000491419 398 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 GM2AP2-201ENST00000491764 562 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC018645.1-201ENST00000505003 109 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC111000.2-201ENST00000507775 550 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 OR5H7P-201ENST00000514084 930 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC026898.1-201ENST00000586404 571 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC004805.3-201ENST00000603178 310 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AP000403.1-201ENST00000603349 851 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 VN1R7P-201ENST00000619242 903 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AL357562.1-201ENST00000624911 609 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC073488.9-201ENST00000631601 754 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 AC079298.1-201ENST00000625026 1619 ntBASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CSB-PGBD3P0DP91 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CSB-PGBD3P0DP91 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms