Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TPM1P09493 SELENOWP1-201ENST00000322792 252 ntBASIC6.29□□□□□ -1.4
TPM1P09493 RN7SKP77-201ENST00000363261 353 ntBASIC6.29□□□□□ -1.4
TPM1P09493 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 BMS1P10-201ENST00000443754 1120 ntBASIC6.29□□□□□ -1.4
TPM1P09493 PPIAP32-201ENST00000449940 472 ntBASIC6.29□□□□□ -1.4
TPM1P09493 AC099670.1-201ENST00000455141 783 ntBASIC6.29□□□□□ -1.4
TPM1P09493 RPS23P2-201ENST00000463671 415 ntBASIC6.29□□□□□ -1.4
TPM1P09493 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.29□□□□□ -1.4
TPM1P09493 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TPM1P09493 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.29□□□□□ -1.4
TPM1P09493 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TPM1P09493 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 MRPS21P8-201ENST00000569196 235 ntBASIC6.29□□□□□ -1.4
TPM1P09493 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 RN7SL66P-201ENST00000582099 264 ntBASIC6.29□□□□□ -1.4
TPM1P09493 AC008507.3-201ENST00000585753 472 ntBASIC6.29□□□□□ -1.4
TPM1P09493 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 COX6CP7-201ENST00000597056 208 ntBASIC6.29□□□□□ -1.4
TPM1P09493 SMIM12P1-201ENST00000603004 274 ntBASIC6.29□□□□□ -1.4
TPM1P09493 Z95327.3-201ENST00000610385 572 ntBASIC6.29□□□□□ -1.4
TPM1P09493 AL080312.2-201ENST00000613001 630 ntBASIC6.29□□□□□ -1.4
TPM1P09493 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.29□□□□□ -1.4
TPM1P09493 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TPM1P09493 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
TPM1P09493 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TPM1P09493 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TPM1P09493 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 AC116158.1-201ENST00000560231 2129 ntBASIC6.28□□□□□ -1.4
TPM1P09493 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 MIR188-201ENST00000385034 86 ntBASIC6.28□□□□□ -1.4
TPM1P09493 U3.28-201ENST00000391249 210 ntBASIC6.28□□□□□ -1.4
TPM1P09493 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 RNA5SP231-201ENST00000410496 138 ntBASIC6.28□□□□□ -1.4
TPM1P09493 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM1P09493 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM1P09493 RPL7AP51-201ENST00000422016 760 ntBASIC6.28□□□□□ -1.4
TPM1P09493 AC009784.1-201ENST00000426484 460 ntBASIC6.28□□□□□ -1.4
TPM1P09493 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 LINC02210-201ENST00000444561 288 ntBASIC6.28□□□□□ -1.4
TPM1P09493 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 AC090589.1-201ENST00000473109 362 ntBASIC6.28□□□□□ -1.4
TPM1P09493 OR4A17P-201ENST00000526032 904 ntBASIC6.28□□□□□ -1.4
TPM1P09493 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.28□□□□□ -1.4
TPM1P09493 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 AC137627.1-201ENST00000545761 289 ntBASIC6.28□□□□□ -1.4
TPM1P09493 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM1P09493 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM1P09493 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TPM1P09493 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TPM1P09493 AC073333.2-201ENST00000603589 769 ntBASIC6.28□□□□□ -1.4
TPM1P09493 AC073389.3-201ENST00000609434 935 ntBASIC6.28□□□□□ -1.4
TPM1P09493 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 AC021766.1-201ENST00000624404 741 ntBASIC6.28□□□□□ -1.4
TPM1P09493 AC073488.6-201ENST00000632293 754 ntBASIC6.28□□□□□ -1.4
TPM1P09493 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TPM1P09493 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM1P09493 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM1P09493 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TPM1P09493 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM1P09493 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM1P09493 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM1P09493 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TPM1P09493 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM1P09493 AC144833.1-201ENST00000567953 4089 ntBASIC6.27□□□□□ -1.41
TPM1P09493 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.27□□□□□ -1.41
TPM1P09493 AC016739.1-201ENST00000405359 345 ntBASIC6.27□□□□□ -1.41
TPM1P09493 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM1P09493 AL133482.1-201ENST00000415988 498 ntBASIC6.27□□□□□ -1.41
TPM1P09493 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM1P09493 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM1P09493 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM1P09493 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM1P09493 AC007346.1-201ENST00000569208 867 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms