Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.34□□□□□ -1.39
RB1P06400 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.34□□□□□ -1.39
RB1P06400 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RB1P06400 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.34□□□□□ -1.39
RB1P06400 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.34□□□□□ -1.39
RB1P06400 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RB1P06400 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 AL513548.1-201ENST00000562904 1724 ntBASIC6.33□□□□□ -1.4
RB1P06400 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 HDAC1P2-201ENST00000453661 1398 ntBASIC6.33□□□□□ -1.4
RB1P06400 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.33□□□□□ -1.4
RB1P06400 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 RNA5SP443-201ENST00000363083 132 ntBASIC6.33□□□□□ -1.4
RB1P06400 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.33□□□□□ -1.4
RB1P06400 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.33□□□□□ -1.4
RB1P06400 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 DPPA2P3-201ENST00000411853 655 ntBASIC6.33□□□□□ -1.4
RB1P06400 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 OR6E1P-201ENST00000414424 923 ntBASIC6.33□□□□□ -1.4
RB1P06400 AC097721.1-201ENST00000427150 1253 ntBASIC6.33□□□□□ -1.4
RB1P06400 SUMO2P1-206ENST00000445436 284 ntBASIC6.33□□□□□ -1.4
RB1P06400 RSL24D1P2-201ENST00000445584 366 ntBASIC6.33□□□□□ -1.4
RB1P06400 AC011225.1-201ENST00000457751 369 ntBASIC6.33□□□□□ -1.4
RB1P06400 RPS23P6-201ENST00000466136 431 ntBASIC6.33□□□□□ -1.4
RB1P06400 RN7SL30P-201ENST00000488416 306 ntBASIC6.33□□□□□ -1.4
RB1P06400 AC093763.2-201ENST00000505334 1223 ntBASIC6.33□□□□□ -1.4
RB1P06400 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 HMGB1P42-201ENST00000532126 553 ntBASIC6.33□□□□□ -1.4
RB1P06400 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RB1P06400 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.33□□□□□ -1.4
RB1P06400 AC011270.1-201ENST00000558606 583 ntBASIC6.33□□□□□ -1.4
RB1P06400 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.33□□□□□ -1.4
RB1P06400 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 AC010547.7-201ENST00000570323 333 ntBASIC6.33□□□□□ -1.4
RB1P06400 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 VN1R81P-201ENST00000602085 372 ntBASIC6.33□□□□□ -1.4
RB1P06400 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.33□□□□□ -1.4
RB1P06400 AC107308.1-201ENST00000615897 301 ntBASIC6.33□□□□□ -1.4
RB1P06400 MIR7155-201ENST00000615925 56 ntBASIC6.33□□□□□ -1.4
RB1P06400 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 AC022905.1-201ENST00000503430 3048 ntBASIC6.33□□□□□ -1.4
RB1P06400 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.33□□□□□ -1.4
RB1P06400 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RB1P06400 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 AC109780.1-201ENST00000451768 1344 ntBASIC6.32□□□□□ -1.4
RB1P06400 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 AL929601.4-201ENST00000613011 1341 ntBASIC6.32□□□□□ -1.4
RB1P06400 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 RN7SKP59-201ENST00000410520 314 ntBASIC6.32□□□□□ -1.4
RB1P06400 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
RB1P06400 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.32□□□□□ -1.4
RB1P06400 NPM1P22-201ENST00000427761 952 ntBASIC6.32□□□□□ -1.4
RB1P06400 AL590399.4-201ENST00000436561 601 ntBASIC6.32□□□□□ -1.4
RB1P06400 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 AC073072.2-201ENST00000447425 348 ntBASIC6.32□□□□□ -1.4
RB1P06400 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.32□□□□□ -1.4
RB1P06400 AC104164.1-201ENST00000460282 590 ntBASIC6.32□□□□□ -1.4
RB1P06400 AC073594.1-201ENST00000462065 364 ntBASIC6.32□□□□□ -1.4
RB1P06400 RPS26P24-201ENST00000497656 331 ntBASIC6.32□□□□□ -1.4
RB1P06400 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.32□□□□□ -1.4
RB1P06400 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.32□□□□□ -1.4
RB1P06400 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.32□□□□□ -1.4
RB1P06400 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.32□□□□□ -1.4
RB1P06400 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 OR4A42P-201ENST00000531397 938 ntBASIC6.32□□□□□ -1.4
RB1P06400 OR10G5P-201ENST00000532733 358 ntBASIC6.32□□□□□ -1.4
RB1P06400 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.32□□□□□ -1.4
RB1P06400 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.32□□□□□ -1.4
RB1P06400 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RB1P06400 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.32□□□□□ -1.4
RB1P06400 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.32□□□□□ -1.4
RB1P06400 AL136295.6-201ENST00000610486 658 ntBASIC6.32□□□□□ -1.4
RB1P06400 AL137246.2-201ENST00000613439 662 ntBASIC6.32□□□□□ -1.4
RB1P06400 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.32□□□□□ -1.4
RB1P06400 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms