Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.6□□□□□ -1.51
TNFP01375 IGKV2-18-201ENST00000522607 343 ntBASIC5.6□□□□□ -1.51
TNFP01375 AC015720.2-201ENST00000567709 334 ntBASIC5.6□□□□□ -1.51
TNFP01375 MIR4489-201ENST00000578869 62 ntBASIC5.6□□□□□ -1.51
TNFP01375 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFP01375 AC006115.2-201ENST00000596823 202 ntBASIC5.6□□□□□ -1.51
TNFP01375 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.6□□□□□ -1.51
TNFP01375 AL512624.1-201ENST00000613638 469 ntBASIC5.6□□□□□ -1.51
TNFP01375 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 AC005224.3-201ENST00000584683 2140 ntBASIC5.6□□□□□ -1.51
TNFP01375 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFP01375 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFP01375 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFP01375 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFP01375 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TNFP01375 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFP01375 AC089998.1-201ENST00000548575 3141 ntBASIC5.59□□□□□ -1.51
TNFP01375 AL138820.1-201ENST00000617901 5305 ntBASIC5.59□□□□□ -1.51
TNFP01375 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 AC005725.1-201ENST00000577346 2607 ntBASIC5.59□□□□□ -1.51
TNFP01375 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFP01375 RPL23AP17-201ENST00000401064 499 ntBASIC5.59□□□□□ -1.51
TNFP01375 Z68694.1-201ENST00000413929 841 ntBASIC5.59□□□□□ -1.51
TNFP01375 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFP01375 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFP01375 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFP01375 SPRYD7P1-201ENST00000443861 570 ntBASIC5.59□□□□□ -1.51
TNFP01375 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFP01375 AL133445.1-201ENST00000467051 452 ntBASIC5.59□□□□□ -1.51
TNFP01375 SLC25A51P1-201ENST00000468432 871 ntBASIC5.59□□□□□ -1.51
TNFP01375 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFP01375 TOMM22P4-201ENST00000511318 336 ntBASIC5.59□□□□□ -1.51
TNFP01375 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFP01375 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.59□□□□□ -1.51
TNFP01375 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.59□□□□□ -1.51
TNFP01375 DPPA3P2-202ENST00000557188 1219 ntBASIC5.59□□□□□ -1.51
TNFP01375 AL163952.1-202ENST00000569625 600 ntBASIC5.59□□□□□ -1.51
TNFP01375 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TNFP01375 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TNFP01375 SNX18P3-202ENST00000565670 1750 ntBASIC5.59□□□□□ -1.51
TNFP01375 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFP01375 ZNF658B-201ENST00000602828 3408 ntBASIC5.59□□□□□ -1.51
TNFP01375 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TNFP01375 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.59□□□□□ -1.52
TNFP01375 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.59□□□□□ -1.52
TNFP01375 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 AC022164.1-201ENST00000568767 2673 ntBASIC5.58□□□□□ -1.52
TNFP01375 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFP01375 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFP01375 RN7SKP162-201ENST00000363605 345 ntBASIC5.58□□□□□ -1.52
TNFP01375 RNA5SP30-201ENST00000365552 115 ntBASIC5.58□□□□□ -1.52
TNFP01375 RNU4-2-201ENST00000365668 141 ntBASIC5.58□□□□□ -1.52
TNFP01375 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.58□□□□□ -1.52
TNFP01375 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 RNU4-64P-201ENST00000410795 131 ntBASIC5.58□□□□□ -1.52
TNFP01375 RPS6P23-201ENST00000413224 722 ntBASIC5.58□□□□□ -1.52
TNFP01375 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFP01375 NENFP1-201ENST00000419476 466 ntBASIC5.58□□□□□ -1.52
TNFP01375 CRIP1P1-201ENST00000427567 185 ntBASIC5.58□□□□□ -1.52
TNFP01375 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 AC012075.1-201ENST00000436549 580 ntBASIC5.58□□□□□ -1.52
TNFP01375 AL390119.1-201ENST00000440329 312 ntBASIC5.58□□□□□ -1.52
TNFP01375 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFP01375 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.58□□□□□ -1.52
TNFP01375 AC125612.1-201ENST00000547580 377 ntBASIC5.58□□□□□ -1.52
TNFP01375 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 MRPS21P7-201ENST00000566937 238 ntBASIC5.58□□□□□ -1.52
TNFP01375 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFP01375 MAPK10-350ENST00000641777 965 ntBASIC5.58□□□□□ -1.52
TNFP01375 AL161756.3-201ENST00000641216 2071 ntBASIC5.58□□□□□ -1.52
TNFP01375 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TNFP01375 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TNFP01375 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms