Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PDGFBP01127 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDGFBP01127 AL050335.1-201ENST00000396909 869 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 FAR2P2-201ENST00000413041 594 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 METTL15P3-201ENST00000415522 1221 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 RPS26P13-201ENST00000419030 330 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFBP01127 FAR2P4-202ENST00000425399 584 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC005033.1-201ENST00000428904 813 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC103563.5-201ENST00000455643 364 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFBP01127 RN7SL97P-201ENST00000486780 299 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 CEACAMP10-202ENST00000495431 496 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 AC093890.1-201ENST00000502554 540 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.97□□□□□ -1.45
PDGFBP01127 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFBP01127 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFBP01127 RPA2P3-201ENST00000533268 770 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 OR11J2P-201ENST00000555298 907 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 HNRNPCP1-201ENST00000556181 766 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFBP01127 MIR4646-201ENST00000580775 63 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFBP01127 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFBP01127 AC024255.1-201ENST00000614376 102 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 AC022960.2-201ENST00000616300 666 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 CCAT2-201ENST00000630920 1752 ntBASIC5.97□□□□□ -1.45
PDGFBP01127 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PDGFBP01127 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PDGFBP01127 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFBP01127 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFBP01127 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PDGFBP01127 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
PDGFBP01127 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDGFBP01127 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.96□□□□□ -1.45
PDGFBP01127 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDGFBP01127 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PDGFBP01127 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFBP01127 AL161912.4-201ENST00000623889 2468 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
PDGFBP01127 RNA5SP183-201ENST00000362452 119 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 RNA5SP333-201ENST00000363466 118 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 RNA5SP334-201ENST00000364825 118 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.96□□□□□ -1.46
PDGFBP01127 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDGFBP01127 MIR640-201ENST00000385086 96 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDGFBP01127 RNU1-77P-201ENST00000390868 162 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 MTND4LP21-201ENST00000415303 295 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFBP01127 OR52B5P-201ENST00000435337 951 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 FABP5P2-201ENST00000439042 408 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 CEACAMP7-201ENST00000444105 496 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 CT45A11P-201ENST00000448043 1134 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 RPS26P41-201ENST00000450370 284 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFBP01127 FRG2FP-204ENST00000453982 852 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 RPS18P6-201ENST00000476880 458 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 RPS21P4-201ENST00000487122 248 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 SNORA58-201ENST00000505219 137 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 AC110775.1-201ENST00000513721 462 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFBP01127 AP000662.1-201ENST00000530952 487 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 AC010547.7-201ENST00000570323 333 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 RNU6-84P-201ENST00000607737 102 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 OR52B5P-202ENST00000641118 1110 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PDGFBP01127 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFBP01127 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
PDGFBP01127 AL929601.4-201ENST00000613011 1341 ntBASIC5.96□□□□□ -1.46
PDGFBP01127 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFBP01127 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
PDGFBP01127 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PDGFBP01127 BIN2P1-201ENST00000504996 1530 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDGFBP01127 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFBP01127 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms