Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RN7SKP151-201ENST00000410230 316 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AC007562.1-201ENST00000421819 517 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.2□□□□□ -1.42
TIMP1P01033 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.2□□□□□ -1.42
TIMP1P01033 AC006335.2-201ENST00000437993 330 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AC023274.2-201ENST00000445264 521 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AL162739.1-201ENST00000450606 307 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AL035090.1-201ENST00000454835 332 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AL022319.1-201ENST00000458183 1167 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 RPEP1-201ENST00000504507 658 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 KCTD9P4-201ENST00000526766 1166 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AP001922.4-201ENST00000526967 290 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
TIMP1P01033 AC006116.3-201ENST00000592968 361 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.2□□□□□ -1.42
TIMP1P01033 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 MIR6810-201ENST00000622701 70 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.2□□□□□ -1.42
TIMP1P01033 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.2□□□□□ -1.42
TIMP1P01033 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.2□□□□□ -1.42
TIMP1P01033 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 AL391261.1-201ENST00000555712 1479 ntBASIC6.2□□□□□ -1.42
TIMP1P01033 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
TIMP1P01033 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TIMP1P01033 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.19□□□□□ -1.42
TIMP1P01033 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.19□□□□□ -1.42
TIMP1P01033 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.19□□□□□ -1.42
TIMP1P01033 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
TIMP1P01033 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TIMP1P01033 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.19□□□□□ -1.42
TIMP1P01033 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TIMP1P01033 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.19□□□□□ -1.42
TIMP1P01033 AC108075.1-201ENST00000424692 529 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 AC011742.2-201ENST00000443818 352 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.19□□□□□ -1.42
TIMP1P01033 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 AL389915.2-201ENST00000454576 441 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.19□□□□□ -1.42
TIMP1P01033 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.19□□□□□ -1.42
TIMP1P01033 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 OR51K1P-201ENST00000510214 950 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 AC078878.1-201ENST00000539832 958 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 BLZF2P-201ENST00000553776 1130 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 OR11J2P-201ENST00000555298 907 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TIMP1P01033 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TIMP1P01033 AL445528.2-201ENST00000620582 470 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TIMP1P01033 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 DOCK11P1-201ENST00000553480 5932 ntBASIC6.19□□□□□ -1.42
TIMP1P01033 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TIMP1P01033 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.19□□□□□ -1.42
TIMP1P01033 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TIMP1P01033 USP9YP3-201ENST00000434481 1766 ntBASIC6.18□□□□□ -1.42
TIMP1P01033 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.18□□□□□ -1.42
TIMP1P01033 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.18□□□□□ -1.42
TIMP1P01033 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
TIMP1P01033 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.18□□□□□ -1.42
TIMP1P01033 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TIMP1P01033 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.18□□□□□ -1.42
TIMP1P01033 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.18□□□□□ -1.42
TIMP1P01033 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TIMP1P01033 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TIMP1P01033 LINC01616-201ENST00000561816 2280 ntBASIC6.18□□□□□ -1.42
TIMP1P01033 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.18□□□□□ -1.42
TIMP1P01033 AL589993.1-201ENST00000407450 2524 ntBASIC6.18□□□□□ -1.42
TIMP1P01033 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.18□□□□□ -1.42
TIMP1P01033 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.18□□□□□ -1.42
TIMP1P01033 RNA5SP333-201ENST00000363466 118 ntBASIC6.18□□□□□ -1.42
TIMP1P01033 RNA5SP334-201ENST00000364825 118 ntBASIC6.18□□□□□ -1.42
TIMP1P01033 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TIMP1P01033 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms