Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM1O00151 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 SNORA74.4-201ENST00000607595 199 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 AC009779.8-202ENST00000607990 932 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 AP003072.5-201ENST00000623872 773 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 AP001962.1-201ENST00000624114 559 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM1O00151 ZNF652P1-201ENST00000442420 1309 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDLIM1O00151 AL022311.1-201ENST00000623726 19416 ntBASIC5.63□□□□□ -1.51
PDLIM1O00151 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM1O00151 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM1O00151 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM1O00151 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PDLIM1O00151 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 RN7SKP171-201ENST00000364417 303 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 RNU6-167P-201ENST00000384292 106 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 YWHAZP4-201ENST00000392459 708 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 PSMA6P1-201ENST00000400275 741 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 AC099782.1-201ENST00000425889 474 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 VN1R96P-201ENST00000446052 858 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 RPL23AP60-201ENST00000450011 454 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 RPL12P31-201ENST00000478433 450 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 RPL23AP40-201ENST00000487630 390 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 PDCL3P4-201ENST00000489621 720 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 CCDC11P1-201ENST00000503137 1162 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 RN7SKP183-201ENST00000517169 324 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDLIM1O00151 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.62□□□□□ -1.51
PDLIM1O00151 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM1O00151 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.62□□□□□ -1.51
PDLIM1O00151 AL596275.2-207ENST00000641188 675 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 CASC19-246ENST00000641625 1606 ntBASIC5.62□□□□□ -1.51
PDLIM1O00151 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM1O00151 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM1O00151 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM1O00151 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
PDLIM1O00151 OR55B1P-203ENST00000641518 2602 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDLIM1O00151 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PDLIM1O00151 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 AL157702.1-201ENST00000398764 426 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AC211486.3-201ENST00000412694 621 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AL359885.1-201ENST00000415786 903 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM1O00151 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 OSTCP4-201ENST00000424397 449 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 VN1R20P-201ENST00000425215 966 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM1O00151 CDY11P-201ENST00000447168 1651 ntBASIC5.61□□□□□ -1.51
PDLIM1O00151 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM1O00151 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms