Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC009135.2-201ENST00000624136 1768 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 RNA5SP326-201ENST00000363209 110 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 RNA5SP131-201ENST00000365452 119 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AC005297.1-201ENST00000444765 862 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 IGBP1P1-201ENST00000554337 1009 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AC093388.1-201ENST00000609166 430 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 RNF19BPY-201ENST00000458209 1550 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.04□□□□□ -1.44
CISHQ9NSE2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AL161912.4-201ENST00000623889 2468 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC013268.3-201ENST00000262716 2324 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 UGT2B24P-201ENST00000514441 1597 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 GAPDHP24-201ENST00000328713 983 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC087752.1-201ENST00000391360 558 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC005042.1-201ENST00000393397 800 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 RPL34P3-201ENST00000421454 338 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 GAPDHP34-201ENST00000432112 823 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 GAPDHP62-201ENST00000515313 990 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC135626.1-201ENST00000556983 435 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 MIR4311-201ENST00000580794 100 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC008521.2-201ENST00000591021 259 ntBASIC6.03□□□□□ -1.44
CISHQ9NSE2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CISHQ9NSE2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.03□□□□□ -1.44
CISHQ9NSE2 AC004076.2-201ENST00000620532 3323 ntBASIC6.02□□□□□ -1.45
CISHQ9NSE2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CISHQ9NSE2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CISHQ9NSE2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CISHQ9NSE2 AC068870.1-201ENST00000563737 2455 ntBASIC6.02□□□□□ -1.45
CISHQ9NSE2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CISHQ9NSE2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 AL031985.1-201ENST00000392713 418 ntBASIC6.02□□□□□ -1.45
CISHQ9NSE2 RN7SKP17-201ENST00000411242 351 ntBASIC6.02□□□□□ -1.45
CISHQ9NSE2 RNF10P1-201ENST00000418589 369 ntBASIC6.02□□□□□ -1.45
CISHQ9NSE2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.02□□□□□ -1.45
CISHQ9NSE2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms