Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL034546.1-201ENST00000623740 3693 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL132656.3-201ENST00000606384 1595 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL159987.1-201ENST00000347911 293 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 OR7E101P-201ENST00000400428 513 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 NPM1P38-201ENST00000403835 865 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 VN1R3-201ENST00000418822 919 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 CDY8P-201ENST00000428380 1279 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 CDY20P-201ENST00000447528 1279 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC114982.2-201ENST00000461396 358 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC090568.1-201ENST00000509499 856 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC021678.3-201ENST00000517893 476 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC139697.1-201ENST00000548429 745 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 COX6CP7-201ENST00000597056 208 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC015712.7-201ENST00000615211 635 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC009120.7-201ENST00000623452 780 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC120036.2-201ENST00000509729 1474 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 AC011933.2-201ENST00000578539 2790 ntBASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC087752.1-201ENST00000391360 558 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 SLC20A1P1-201ENST00000413906 956 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AK4P4-201ENST00000419465 646 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 RPS23P9-201ENST00000448848 438 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 MEMO1P4-201ENST00000453590 386 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 RPS23P2-201ENST00000463671 415 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 RPSAP37-201ENST00000470913 821 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC009120.1-201ENST00000493458 473 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 DUTP1-201ENST00000493631 470 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 OR7E157P-201ENST00000494376 911 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 GAPDHP62-201ENST00000515313 990 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 RNA5SP271-201ENST00000516700 88 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 TRIM51DP-201ENST00000529746 596 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC137627.1-201ENST00000545761 289 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 DHFRP1-201ENST00000579682 559 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 FAM27E4-201ENST00000605259 342 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC015982.1-201ENST00000608113 465 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.44□□□□□ -1.38
CCSER1Q9C0I3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCSER1Q9C0I3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms