Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC004854.1-201ENST00000440356 349 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 RPS19P6-201ENST00000441327 433 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 RPL6P5-201ENST00000445678 828 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AL022237.1-201ENST00000446663 358 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 RPS18P1-201ENST00000447840 458 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 snoU109.3-201ENST00000459477 145 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SYT14P1-201ENST00000481459 721 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC116562.1-201ENST00000485355 781 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 RN7SL423P-201ENST00000486202 304 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 PRELID3BP6-201ENST00000503839 571 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AP001372.4-201ENST00000524889 472 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 CYCSP25-201ENST00000525280 316 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC009729.1-201ENST00000548873 1133 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 MTND1P24-201ENST00000552175 861 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 CBX3P2-202ENST00000583365 535 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AL589863.1-201ENST00000595383 631 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC023762.1-201ENST00000603280 584 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC073137.1-201ENST00000605636 634 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC078880.5-201ENST00000617845 421 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC021422.1-201ENST00000621212 473 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 Z95114.1-201ENST00000624264 14574 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC017078.1-201ENST00000416146 368 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AL022324.2-201ENST00000434827 780 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC079922.1-201ENST00000443291 359 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 RPL7P33-201ENST00000444159 742 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 MORF4-201ENST00000447135 971 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC103563.5-201ENST00000455643 364 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 DUXAP8-207ENST00000456786 622 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC111000.6-201ENST00000514471 709 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 RNA5SP418-201ENST00000515951 117 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 TDGP1-201ENST00000543961 1229 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC008055.1-201ENST00000547032 609 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AL049838.1-201ENST00000563647 981 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 OR4H6P-201ENST00000563771 921 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC025283.1-201ENST00000572039 734 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC026898.1-201ENST00000586404 571 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC005332.4-201ENST00000592752 579 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC013244.3-201ENST00000605614 388 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC006924.1-201ENST00000610750 559 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 DUXAP10-204ENST00000612052 616 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 MIR6811-201ENST00000620409 58 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC211486.4-201ENST00000621495 113 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 GUCY1B2-204ENST00000531898 1979 ntBASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms