Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 ATP5LP2-201ENST00000440646 311 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC005077.1-201ENST00000449226 375 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AL133244.1-201ENST00000456007 258 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 SNRPCP3-201ENST00000474888 476 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 SCARNA18.1-201ENST00000516330 83 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 RN7SKP35-201ENST00000517210 151 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC068768.2-201ENST00000602352 343 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 MIR6071-201ENST00000616741 78 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 MIR1910-201ENST00000636955 80 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 RBPJP7-201ENST00000442803 1447 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 RBPJP5-201ENST00000449433 1447 ntBASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CHMP4AQ9BY43 AC010266.2-201ENST00000564741 3255 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL355377.1-201ENST00000621125 1653 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC023490.2-201ENST00000359859 470 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 RNU1-146P-201ENST00000364015 165 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 U3.23-201ENST00000391132 200 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL096829.1-201ENST00000413677 457 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC007568.1-201ENST00000422912 471 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC023141.3-201ENST00000436698 278 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC110602.1-201ENST00000437414 318 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL138899.2-201ENST00000439139 499 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 PCNPP2-201ENST00000441651 455 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 RPS27AP3-201ENST00000453803 454 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 RPL23AP40-201ENST00000487630 390 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC090115.2-201ENST00000548060 883 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC018552.1-201ENST00000562099 811 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 OR4H6P-201ENST00000563771 921 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC005244.1-201ENST00000582566 339 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AC022106.1-201ENST00000612834 766 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 AL121890.2-201ENST00000617644 465 ntBASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4AQ9BY43 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
CHMP4AQ9BY43 AOX3P-204ENST00000491025 2107 ntBASIC7.84□□□□□ -1.16
CHMP4AQ9BY43 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.84□□□□□ -1.16
CHMP4AQ9BY43 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.84□□□□□ -1.16
CHMP4AQ9BY43 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.84□□□□□ -1.16
CHMP4AQ9BY43 AL591135.1-201ENST00000401578 5914 ntBASIC7.84□□□□□ -1.16
CHMP4AQ9BY43 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 RNA5SP110-201ENST00000362638 115 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AL136131.1-201ENST00000406079 803 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 RN7SKP151-201ENST00000410230 316 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC093827.1-201ENST00000480094 861 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms