Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 MAPK10-386ENST00000642038 2354 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC020661.5-201ENST00000624853 1854 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 MIR323A-201ENST00000362199 86 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RN7SKP55-201ENST00000364888 307 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RN7SKP130-201ENST00000364924 301 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 Y_RNA.431-201ENST00000384086 102 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RNU6-574P-201ENST00000384265 107 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 YWHAZP6-201ENST00000399764 738 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RNU2-47P-201ENST00000410649 186 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 HMGN1P20-201ENST00000411849 300 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL121878.1-201ENST00000418638 859 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RPL35P8-201ENST00000433284 337 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 TMX2P1-201ENST00000436507 708 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 BX679664.2-201ENST00000439282 283 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 NXT1P1-201ENST00000458481 316 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 RN7SL610P-201ENST00000463845 291 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 HMGB1P44-201ENST00000508597 572 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL078601.3-201ENST00000573303 535 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC012065.4-201ENST00000602445 679 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC136443.5-201ENST00000603741 370 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 SEPT7P9-203ENST00000604116 343 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC007621.1-201ENST00000604544 437 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC073137.1-201ENST00000605636 634 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC063962.1-201ENST00000608199 521 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL451054.1-201ENST00000621770 772 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AC027559.1-201ENST00000636288 271 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL390195.2-201ENST00000564771 2023 ntBASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL25A1Q9BXS0 AL031595.3-201ENST00000624919 14262 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms