Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.19□□□□□ -1.74
LITAFQ99732 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 SUMO2P14-201ENST00000604488 293 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.19□□□□□ -1.74
LITAFQ99732 PTCHD3P1-201ENST00000612350 537 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 PART1_2.1-201ENST00000612397 250 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 AL359513.1-201ENST00000614364 557 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 PART1_3.1-201ENST00000619680 131 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 AC006328.2-201ENST00000623198 397 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 AC012005.2-201ENST00000624333 397 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 AL035425.4-201ENST00000624509 1063 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.19□□□□□ -1.74
LITAFQ99732 AC079776.5-201ENST00000641920 211 ntBASIC4.19□□□□□ -1.74
LITAFQ99732 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.19□□□□□ -1.74
LITAFQ99732 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
LITAFQ99732 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LITAFQ99732 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
LITAFQ99732 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.18□□□□□ -1.74
LITAFQ99732 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 RN7SKP186-201ENST00000365371 303 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 LRRC37BP1-201ENST00000398851 714 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 HNRNPCP2-201ENST00000399515 881 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC119751.3-201ENST00000399720 670 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 VIM2P-201ENST00000402383 1294 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AL136100.1-201ENST00000407696 330 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 RNA5SP177-201ENST00000410122 107 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 RPS24P7-201ENST00000416921 246 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AL929472.1-201ENST00000417484 429 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 MTCO3P4-201ENST00000419236 787 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 EIF4A1P1-201ENST00000420241 934 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC134879.1-201ENST00000426062 394 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 RPS27AP6-201ENST00000427962 448 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC105052.2-201ENST00000434317 794 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 PSMD8P1-201ENST00000436275 769 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 RPSAP40-201ENST00000442343 891 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC004022.1-201ENST00000447766 1066 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 ZNF886P-201ENST00000450781 723 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 RPL7AP71-201ENST00000451120 739 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 OR7E7P-201ENST00000455678 1012 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AL133480.2-201ENST00000456723 487 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC004263.1-201ENST00000479327 332 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
LITAFQ99732 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 RPL21P131-201ENST00000497298 483 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC117522.2-201ENST00000510049 657 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AL390198.2-201ENST00000510553 222 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC023794.3-204ENST00000510754 236 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LITAFQ99732 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.18□□□□□ -1.74
LITAFQ99732 OR8Q1P-201ENST00000526467 655 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC025252.2-201ENST00000537470 502 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AC135279.1-201ENST00000543493 504 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 AP003717.3-201ENST00000544832 1180 ntBASIC4.18□□□□□ -1.74
LITAFQ99732 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.18□□□□□ -1.74
LITAFQ99732 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.18□□□□□ -1.74
LITAFQ99732 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.18□□□□□ -1.74
LITAFQ99732 ANP32BP1-202ENST00000568553 737 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms