Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 RPL21P136-201ENST00000605378 396 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 NF1P10-201ENST00000613227 742 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AC069234.4-201ENST00000621276 412 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AL136228.1-201ENST00000622221 319 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AC020923.1-201ENST00000624021 917 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AL356094.1-201ENST00000624663 1212 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.82□□□□□ -1.48
PKP4Q99569 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PKP4Q99569 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 LYARP1-201ENST00000436977 1501 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
PKP4Q99569 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.82□□□□□ -1.48
PKP4Q99569 MSL3P1-202ENST00000440028 1468 ntBASIC5.82□□□□□ -1.48
PKP4Q99569 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.82□□□□□ -1.48
PKP4Q99569 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PKP4Q99569 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PKP4Q99569 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PKP4Q99569 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PKP4Q99569 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC107977.1-201ENST00000355745 939 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AL096800.1-201ENST00000405326 893 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC234781.4-201ENST00000419384 244 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 PTP4A1P1-201ENST00000420539 515 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 MTND2P9-201ENST00000422293 931 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 AL138787.1-202ENST00000437804 898 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC239798.3-201ENST00000454459 408 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC068228.1-201ENST00000461723 211 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC008629.2-201ENST00000503783 483 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 RN7SKP288-201ENST00000516227 268 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 RNA5SP340-201ENST00000517132 107 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 HNRNPRP2-201ENST00000528421 743 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PKP4Q99569 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC244502.2-201ENST00000543361 851 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC011270.1-201ENST00000558606 583 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC090079.2-201ENST00000575289 768 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.81□□□□□ -1.48
PKP4Q99569 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC008507.3-201ENST00000585753 472 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.81□□□□□ -1.48
PKP4Q99569 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.81□□□□□ -1.48
PKP4Q99569 AC005972.3-201ENST00000606304 481 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AL021918.2-201ENST00000613415 194 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 AC073593.1-201ENST00000624500 411 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.81□□□□□ -1.48
PKP4Q99569 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 AP005432.1-201ENST00000580891 3485 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 AC007342.5-201ENST00000571340 2142 ntBASIC5.81□□□□□ -1.48
PKP4Q99569 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PKP4Q99569 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PKP4Q99569 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PKP4Q99569 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 AC012254.3-201ENST00000591183 2117 ntBASIC5.8□□□□□ -1.48
PKP4Q99569 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
PKP4Q99569 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PKP4Q99569 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PKP4Q99569 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PKP4Q99569 RNFT1P3-201ENST00000340898 1052 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms